RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 A0A0G2JNJ9 132 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 GXYLT2A0PJZ3 443 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 FAM90A27PA6NNH2 459 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 FADS1O60427 444 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 TOXO94900 526 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 MYZAPP0CAP1 466 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 LAMP1P11279 417 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 COX6B1P14854 86 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 GRK2P25098 689 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 GABRA3P34903 492 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 EVI2BP34910 448 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 HPCAL1P37235 193 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 MAP3K8P41279 467 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 RFX3P48380 749 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 SLC1A6P48664 564 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 PRKAG1P54619 331 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 MRPS22P82650 360 aaKnown RBP11.74□□□□□ -0.53
HDAC1-209ENST00000484305 PDCD2Q16342 344 aaPredicted RBP11.74□□□□□ -0.53
HDAC1-209ENST00000484305 NHSL2Q5HYW2 709 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 BEND6Q5SZJ8 279 aaPredicted RBP11.74□□□□□ -0.53
HDAC1-209ENST00000484305 SEM1Q6ZVN7 128 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 PLCZ1Q86YW0 608 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 ANKRD42Q8N9B4 389 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 NUP43Q8NFH3 380 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 PIK3R3Q92569 461 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 HOXB13Q92826 284 aaPredicted RBP11.74□□□□□ -0.53
HDAC1-209ENST00000484305 ABTB1Q969K4 478 aaPredicted RBP11.74□□□□□ -0.53
HDAC1-209ENST00000484305 GIMAP5Q96F15 307 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 UGT2B28Q9BY64 529 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 PRDM14Q9GZV8 571 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 SIRT3Q9NTG7 399 aaPredicted RBP11.74□□□□□ -0.53
HDAC1-209ENST00000484305 NTMQ9P121 344 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 Q9UFV3 132 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 RAP2CQ9Y3L5 183 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 ABCA12Q86UK0 2595 aa11.74□□□□□ -0.53
HDAC1-209ENST00000484305 A0A1W2PRB8 838 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 AHRRA9YTQ3 701 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 EMC8O43402 210 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 SCO2O43819 266 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 ERLIN1O75477 346 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 IL33O95760 270 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 IGKV1D-16P01601 117 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 ACP2P11117 423 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 G6PDP11413 515 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 PTGER4P35408 488 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 RPL3P39023 403 aaKnown RBP11.73□□□□□ -0.53
HDAC1-209ENST00000484305 ZFP36L2P47974 494 aaKnown RBP11.73□□□□□ -0.53
HDAC1-209ENST00000484305 RPL14P50914 215 aaKnown RBP11.73□□□□□ -0.53
HDAC1-209ENST00000484305 WNT3P56703 355 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 EMX2Q04743 252 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 TFF3Q07654 80 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 MLC1Q15049 377 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 ACSF3Q4G176 576 aaPredicted RBP11.73□□□□□ -0.53
HDAC1-209ENST00000484305 SZRD1Q7Z422 152 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 LIX1LQ8IVB5 337 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 RIMKLAQ8IXN7 391 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 ACBD4Q8NC06 268 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 OR14L1PQ8NHC6 308 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 CEP70Q8NHQ1 597 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 FBXO30Q8TB52 745 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 GPR151Q8TDV0 419 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 FAM120BQ96EK7 910 aaKnown RBP11.73□□□□□ -0.53
HDAC1-209ENST00000484305 RMND5BQ96G75 393 aaPredicted RBP11.73□□□□□ -0.53
HDAC1-209ENST00000484305 C16orf58Q96GQ5 468 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 WDYHV1Q96HA8 205 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 DOCK7Q96N67 2140 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 MS4A4EQ96PG1 132 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 PAIP2Q9BPZ3 127 aaKnown RBP11.73□□□□□ -0.53
HDAC1-209ENST00000484305 RTN4RQ9BZR6 473 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 OR2B2Q9GZK3 357 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 AKTIPQ9H8T0 292 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 C3orf14Q9HBI5 128 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 KCNJ16Q9NPI9 418 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 CAMK2AQ9UQM7 478 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.73□□□□□ -0.53
HDAC1-209ENST00000484305 ADGRG4Q8IZF6 3080 aa11.73□□□□□ -0.53
HDAC1-209ENST00000484305 APCP25054 2843 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 TMEM120BA0PK00 339 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 TTC36A6NLP5 189 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 ZIC3O60481 467 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 NKX2-2O95096 273 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 KCNH1O95259 989 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 EPPINO95925 133 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 ACTL6AO96019 429 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 SRD5A2P31213 254 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 WDR4P57081 412 aaKnown RBP11.72□□□□□ -0.53
HDAC1-209ENST00000484305 BST1Q10588 318 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 STX3Q13277 289 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 CPTPQ5TA50 214 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 HHATQ5VTY9 493 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 MFSD12Q6NUT3 480 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 GALNT10Q86SR1 603 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 MARCH3Q86UD3 253 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 IFNEQ86WN2 208 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 TRIM42Q8IWZ5 723 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 PM20D2Q8IYS1 436 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 ZNF295-AS1Q8N0V1 137 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 CDRT4Q8N9R6 151 aa11.72□□□□□ -0.53
HDAC1-209ENST00000484305 SLC16A11Q8NCK7 471 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms