RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 MAGEA9P43362 315 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 RFTN1Q14699 578 aaPredicted RBP3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 SLC10A1Q14973 349 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 UBE2V2Q15819 145 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 CDKN3Q16667 212 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 Q1RN00 199 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 TIMM50Q3ZCQ8 353 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 ZNF311Q5JNZ3 666 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 ATAD3CQ5T2N8 411 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 MEDAGQ5VYS4 303 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 SLX4IPQ5VYV7 408 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 ZNF774Q6NX45 483 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 PNCKQ6P2M8 343 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 AFTPHQ6ULP2 937 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 CCBE1Q6UXH8 406 aaPredicted RBP3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 CATSPER4Q7RTX7 472 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 CBWD2Q8IUF1 395 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 C11orf24Q96F05 449 aaPredicted RBP3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 TBCDQ9BTW9 1192 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 NFKBIZQ9BYH8 718 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 DPH5Q9H2P9 285 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 EXOSC3Q9NQT5 275 aaKnown RBP3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 ELOVL2Q9NXB9 296 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 GALPQ9UBC7 116 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 U3KQV3 271 aa3.54□□□□□ -1.84
SMNDC1-205ENST00000477763 POGZQ7Z3K3 1410 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 CCDC7Q96M83 1385 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 CCT8L1PA6NM43 557 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 G3V3Y1 287 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 SAP18O00422 153 aaKnown RBP3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 CASKO14936 926 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 PPIHO43447 177 aaKnown RBP3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 RAMP1O60894 148 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 PGAM2P15259 253 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 H2AFXP16104 143 aaPredicted RBP3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 DESP17661 470 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 SDC1P18827 310 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 CYP2F1P24903 491 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 ADRA1AP35348 466 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 NOVP48745 357 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 POU3F4P49335 361 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 KRTAP10-3P60369 221 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 RPS6P62753 249 aaKnown RBP3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 RUNX3Q13761 415 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 TFDP1Q14186 410 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 CAMK4Q16566 473 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 DCAF4L1Q3SXM0 396 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 LGSNQ5TDP6 509 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 MARC1Q5VT66 337 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 BAIAP2L2Q6UXY1 529 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 FAM43BQ6ZT52 329 aaPredicted RBP3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 CENPUQ71F23 418 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 LRRC70Q7Z2Q7 622 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 EFCAB13Q8IY85 973 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 GCNT2Q8N0V5 402 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 SPAG16Q8N0X2 631 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 CNPY4Q8N129 248 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 STKLD1Q8NE28 680 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 ADIPOR1Q96A54 375 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 CCSER1Q9C0I3 900 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 RDH8Q9NYR8 311 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 RSPH14Q9UHP6 348 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 ISY1Q9ULR0 285 aaKnown RBP3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 AP4B1Q9Y6B7 739 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 HCFC1P51610 2035 aa3.53□□□□□ -1.84
SMNDC1-205ENST00000477763 CARMIL1Q5VZK9 1371 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 FER1L5A0AVI2 2057 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 A0A0U1RQV5 110 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 TM9SF1O15321 606 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 ANP32DO95626 131 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 DIRAS3O95661 229 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 AK1P00568 194 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 ALPIP09923 528 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 CT45A10P0DMU9 189 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 CALCBP10092 127 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 UMPSP11172 480 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 LAMP1P11279 417 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 CALRP27797 417 aaKnown RBP3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 KIF5BP33176 963 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 PTGFRP43088 359 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 CSRP3P50461 194 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 POLR2FP61218 127 aaKnown RBP3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 PAX2Q02962 417 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 PUDPQ08623 228 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 IL18R1Q13478 541 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 TRIP10Q15642 601 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 DCST2Q5T1A1 773 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 SCYL2Q6P3W7 929 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 GCNT7Q6ZNI0 430 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 HPS6Q86YV9 775 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 UNC5CLQ8IV45 518 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 TYMSOSQ8TAI1 123 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 PPP1R16AQ96I34 528 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 HPDLQ96IR7 371 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 VPS35Q96QK1 796 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 OR5M11Q96RB7 305 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 GPA33Q99795 319 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 HCAR1Q9BXC0 346 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 TBC1D10AQ9BXI6 508 aa3.52□□□□□ -1.85
SMNDC1-205ENST00000477763 COMMD4Q9H0A8 199 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms