RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 SDCCAG3Q96C92 435 aa18.52■□□□□ 0.56
GTF3A-202ENST00000419181 C3orf14Q9HBI5 128 aa18.52■□□□□ 0.56
GTF3A-202ENST00000419181 PNPOQ9NVS9 261 aa18.52■□□□□ 0.56
GTF3A-202ENST00000419181 COQ3Q9NZJ6 369 aa18.52■□□□□ 0.56
GTF3A-202ENST00000419181 MED12Q93074 2177 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 A0A1W2PRB8 838 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 EMC8O43402 210 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 SNNO75324 88 aaPredicted RBP18.51■□□□□ 0.55
GTF3A-202ENST00000419181 NKX2-2O95096 273 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 IL33O95760 270 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 GABRA1P14867 456 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 GABRA3P34903 492 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 EVI2BP34910 448 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 PRKAG1P54619 331 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 CLDN8P56748 225 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 NUP107P57740 925 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 PMPCAQ10713 525 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 TOMM20Q15388 145 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 VPS26BQ4G0F5 336 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 NHSL2Q5HYW2 709 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 MFSD12Q6NUT3 480 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 ACAD11Q709F0 780 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 SZRD1Q7Z422 152 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 CAMKMTQ7Z624 323 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 PLCZ1Q86YW0 608 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 LRRC34Q8IZ02 419 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 PSMA8Q8TAA3 256 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 RND1Q92730 232 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 FAM120BQ96EK7 910 aaKnown RBP18.51■□□□□ 0.55
GTF3A-202ENST00000419181 PRPF18Q99633 342 aaKnown RBP18.51■□□□□ 0.55
GTF3A-202ENST00000419181 TTYH2Q9BSA4 534 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 NUF2Q9BZD4 464 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 MEAF6Q9HAF1 191 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 CHST11Q9NPF2 352 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 NKIRAS1Q9NYS0 192 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 MRTO4Q9UKD2 239 aaKnown RBP18.51■□□□□ 0.55
GTF3A-202ENST00000419181 ABCG2Q9UNQ0 655 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 RNF6Q9Y252 685 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 SLC6A5Q9Y345 797 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 ARHGAP21Q5T5U3 1957 aa18.51■□□□□ 0.55
GTF3A-202ENST00000419181 NUP214P35658 2090 aaPredicted RBP18.51■□□□□ 0.55
GTF3A-202ENST00000419181 GXYLT2A0PJZ3 443 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 B4DXG7 233 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 FADS1O60427 444 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 HOXD4P09016 255 aaPredicted RBP18.5■□□□□ 0.55
GTF3A-202ENST00000419181 ACP2P11117 423 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 PSMD4P55036 377 aaKnown RBP18.5■□□□□ 0.55
GTF3A-202ENST00000419181 DIO3P55073 304 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 PRR5P85299 388 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 WIPI1Q5MNZ9 446 aaPredicted RBP18.5■□□□□ 0.55
GTF3A-202ENST00000419181 EXOSC6Q5RKV6 272 aaKnown RBP18.5■□□□□ 0.55
GTF3A-202ENST00000419181 C1orf185Q5T7R7 199 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 VASNQ6EMK4 673 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 ULK2Q8IYT8 1036 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 RAB3IL1Q8TBN0 382 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 GPR151Q8TDV0 419 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 CA5BP1Q8WTZ4 195 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 OR5P2Q8WZ92 322 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 PIK3R3Q92569 461 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 TIMP4Q99727 224 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 BHLHE41Q9C0J9 482 aaPredicted RBP18.5■□□□□ 0.55
GTF3A-202ENST00000419181 OR2B2Q9GZK3 357 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 ZCCHC3Q9NUD5 404 aaKnown RBP18.5■□□□□ 0.55
GTF3A-202ENST00000419181 THAP1Q9NVV9 213 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 FAM120CQ9NX05 1096 aaKnown RBP18.5■□□□□ 0.55
GTF3A-202ENST00000419181 FLRT3Q9NZU0 649 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 FBXL2Q9UKC9 423 aa18.5■□□□□ 0.55
GTF3A-202ENST00000419181 CACNA1DQ01668 2161 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 ADGRG4Q8IZF6 3080 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 KCNH1O95259 989 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 IGKV1D-16P01601 117 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 GLI4P10075 376 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 BMP7P18075 431 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 CHRNB4P30926 498 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 PTGER4P35408 488 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 AGBL2Q5U5Z8 902 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 ZCCHC12Q6PEW1 402 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 YRDCQ86U90 279 aaKnown RBP18.49■□□□□ 0.55
GTF3A-202ENST00000419181 SLC16A11Q8NCK7 471 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 FBXO30Q8TB52 745 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 ASB5Q8WWX0 329 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 SLC9A6Q92581 669 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 RMND5BQ96G75 393 aaPredicted RBP18.49■□□□□ 0.55
GTF3A-202ENST00000419181 DUSP26Q9BV47 211 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 UGT2B28Q9BY64 529 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 PRDM14Q9GZV8 571 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 ALKBH4Q9NXW9 302 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 PKDREJQ9NTG1 2253 aa18.49■□□□□ 0.55
GTF3A-202ENST00000419181 C17orf51A8MQB3 221 aa18.48■□□□□ 0.55
GTF3A-202ENST00000419181 HNRNPRO43390 633 aaKnown RBP18.48■□□□□ 0.55
GTF3A-202ENST00000419181 SCO2O43819 266 aa18.48■□□□□ 0.55
GTF3A-202ENST00000419181 C6orf47O95873 294 aa18.48■□□□□ 0.55
GTF3A-202ENST00000419181 SRD5A2P31213 254 aa18.48■□□□□ 0.55
GTF3A-202ENST00000419181 RFX3P48380 749 aa18.48■□□□□ 0.55
GTF3A-202ENST00000419181 DUSP5Q16690 384 aa18.48■□□□□ 0.55
GTF3A-202ENST00000419181 LSM12Q3MHD2 195 aaKnown RBP18.48■□□□□ 0.55
GTF3A-202ENST00000419181 DCST1Q5T197 706 aa18.48■□□□□ 0.55
GTF3A-202ENST00000419181 ATG16L1Q676U5 607 aa18.48■□□□□ 0.55
GTF3A-202ENST00000419181 OR5M10Q6IEU7 315 aa18.48■□□□□ 0.55
GTF3A-202ENST00000419181 CCDC71Q8IV32 467 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms