RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 KXD1Q9BQD3 176 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 CNPY3Q9BT09 278 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 RAB11FIP5Q9BXF6 653 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 SLC29A3Q9BZD2 475 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 MIS12Q9H081 205 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 KLHL31Q9H511 634 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 SMYD3Q9H7B4 428 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 AAMDCQ9H7C9 122 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 DYRK4Q9NR20 520 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 ZFP57Q9NU63 452 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 TXLNGQ9NUQ3 528 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 MED17Q9NVC6 651 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 PLEK2Q9NYT0 353 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 DCDC2Q9UHG0 476 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 POLDIP2Q9Y2S7 368 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 TIMM10BQ9Y5J6 103 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 KPTNQ9Y664 436 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 MAD1L1Q9Y6D9 718 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 COLEC10Q9Y6Z7 277 aa4.46□□□□□ -1.69
GABPB1-204ENST00000396464 NCAPD3P42695 1498 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 PRAG1Q86YV5 1406 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 IQANK1A0A1B0GTG1 560 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 MED19A0JLT2 244 aaPredicted RBP4.46□□□□□ -1.7
GABPB1-204ENST00000396464 LINC00473A8K010 186 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 ZNF732B4DXR9 585 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 H3BMH7 237 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 J3KR12 359 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 FPGTO14772 594 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 SIVA1O15304 175 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 PEX1O43933 1283 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 ZIC3O60481 467 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 TSPAN2O60636 221 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 BMP10O95393 424 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 TTLL1O95922 423 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 PIGRP01833 764 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 SERPIND1P05546 499 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 ARSBP15848 533 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 POLR2CP19387 275 aaPredicted RBP4.46□□□□□ -1.7
GABPB1-204ENST00000396464 MMP11P24347 488 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 GTF2E2P29084 291 aaKnown RBP4.46□□□□□ -1.7
GABPB1-204ENST00000396464 CRYBB2P43320 205 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 UQCRFS1P47985 274 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 RARRES1P49788 294 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 KLC1Q07866 573 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 CEACAM7Q14002 265 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 HNF4GQ14541 408 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 MAPRE2Q15555 327 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 C18orf21Q32NC0 220 aaPredicted RBP4.46□□□□□ -1.7
GABPB1-204ENST00000396464 GPR33Q49SQ1 333 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 OTUD3Q5T2D3 398 aaPredicted RBP4.46□□□□□ -1.7
GABPB1-204ENST00000396464 PAPD7Q5XG87 772 aaKnown RBP4.46□□□□□ -1.7
GABPB1-204ENST00000396464 KIAA0895LQ68EN5 471 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 TMIGD1Q6UXZ0 262 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 LINGO4Q6UY18 593 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 TMEM64Q6YI46 380 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 DPY19L2P2Q6ZN68 376 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 C19orf35Q6ZS72 473 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 P4HA3Q7Z4N8 544 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 SNX20Q7Z614 316 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 DCUN1D3Q8IWE4 304 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 TEX26Q8N6G2 289 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 FAM98AQ8NCA5 519 aaKnown RBP4.46□□□□□ -1.7
GABPB1-204ENST00000396464 FBXL13Q8NEE6 735 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 UBA3Q8TBC4 463 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 IRGQQ8WZA9 623 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 SMPDL3AQ92484 453 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 SMG7Q92540 1137 aaKnown RBP4.46□□□□□ -1.7
GABPB1-204ENST00000396464 TANKQ92844 425 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 BPIFA2Q96DR5 249 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 MTBPQ96DY7 904 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 CHMP6Q96FZ7 201 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 GLT1D1Q96MS3 346 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 TSSK3Q96PN8 268 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 AIFM2Q9BRQ8 373 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 TTYH2Q9BSA4 534 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 ANGPTL4Q9BY76 406 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 DUSP16Q9BY84 665 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 POTEKPQ9BYX7 375 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 SEMA4CQ9C0C4 833 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 TLE6Q9H808 572 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 CLK4Q9HAZ1 481 aaKnown RBP4.46□□□□□ -1.7
GABPB1-204ENST00000396464 RAVER2Q9HCJ3 691 aaKnown RBP4.46□□□□□ -1.7
GABPB1-204ENST00000396464 ADAP2Q9NPF8 381 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 LYARQ9NX58 379 aaKnown RBP4.46□□□□□ -1.7
GABPB1-204ENST00000396464 NKIRAS1Q9NYS0 192 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 SLC12A6Q9UHW9 1150 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 IKZF2Q9UKS7 526 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 PRPF19Q9UMS4 504 aaKnown RBP4.46□□□□□ -1.7
GABPB1-204ENST00000396464 RNF6Q9Y252 685 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 STARD10Q9Y365 291 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 YIPF1Q9Y548 306 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 PCDHAC2Q9Y5I4 1007 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 CCDC7Q96M83 1385 aa4.46□□□□□ -1.7
GABPB1-204ENST00000396464 PTPRUQ92729 1446 aa4.45□□□□□ -1.7
GABPB1-204ENST00000396464 SERINC4A6NH21 518 aa4.45□□□□□ -1.7
GABPB1-204ENST00000396464 SRRM4A7MD48 611 aaKnown RBP4.45□□□□□ -1.7
GABPB1-204ENST00000396464 MID1O15344 667 aa4.45□□□□□ -1.7
GABPB1-204ENST00000396464 LATO43561 262 aa4.45□□□□□ -1.7
GABPB1-204ENST00000396464 SRPX2O60687 465 aaPredicted RBP4.45□□□□□ -1.7
GABPB1-204ENST00000396464 SH3BGRLO75368 114 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms