RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 ILF3Q12906 894 aaKnown RBP eCLIP16.9■□□□□ 0.3
CD40-201ENST00000372276 DNASE1L3Q13609 305 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 DSG2Q14126 1118 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 PRRT3Q5FWE3 981 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 HSDL2Q6YN16 418 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 FRRS1Q6ZNA5 592 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 PRICKLE2Q7Z3G6 844 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 VRK2Q86Y07 508 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 CADM3Q8N126 398 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 IQCF1Q8N6M8 205 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 FLVCR1-AS1Q8TAF5 88 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 CHAC2Q8WUX2 184 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 KAT2AQ92830 837 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 UFD1Q92890 307 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 RNFT2Q96EX2 444 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 SLC41A3Q96GZ6 507 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 ZFYVE21Q9BQ24 234 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 JAM3Q9BX67 310 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 PBX4Q9BYU1 374 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 S1PR5Q9H228 398 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 DUSP22Q9NRW4 184 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 ACTR10Q9NZ32 417 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 PILRAQ9UKJ1 303 aa16.9■□□□□ 0.3
CD40-201ENST00000372276 PLOD3O60568 738 aa16.89■□□□□ 0.29
CD40-201ENST00000372276 STATHP02808 62 aa16.89■□□□□ 0.29
CD40-201ENST00000372276 ADRA2AP08913 450 aa16.89■□□□□ 0.29
CD40-201ENST00000372276 ALPPL2P10696 532 aa16.89■□□□□ 0.29
CD40-201ENST00000372276 ALOX12P18054 663 aa16.89■□□□□ 0.29
CD40-201ENST00000372276 ACSM1Q08AH1 577 aa16.89■□□□□ 0.29
CD40-201ENST00000372276 ADAM15Q13444 863 aa16.89■□□□□ 0.29
CD40-201ENST00000372276 ZSWIM7Q19AV6 140 aa16.89■□□□□ 0.29
CD40-201ENST00000372276 ARMC4Q5T2S8 1044 aa16.89■□□□□ 0.29
CD40-201ENST00000372276 KIF18BQ86Y91 864 aa16.89■□□□□ 0.29
CD40-201ENST00000372276 CDRT4Q8N9R6 151 aa16.89■□□□□ 0.29
CD40-201ENST00000372276 OR7G2Q8NG99 324 aa16.89■□□□□ 0.29
CD40-201ENST00000372276 BMFQ96LC9 184 aa16.89■□□□□ 0.29
CD40-201ENST00000372276 NKX2-4Q9H2Z4 354 aa16.89■□□□□ 0.29
CD40-201ENST00000372276 SEMA4GQ9NTN9 838 aa16.89■□□□□ 0.29
CD40-201ENST00000372276 C14orf105Q9NVL8 296 aa16.89■□□□□ 0.29
CD40-201ENST00000372276 H2AFY2Q9P0M6 372 aaPredicted RBP16.89■□□□□ 0.29
CD40-201ENST00000372276 CDH10Q9Y6N8 788 aa16.89■□□□□ 0.29
CD40-201ENST00000372276 CPSF4LA6NMK7 179 aaKnown RBP16.88■□□□□ 0.29
CD40-201ENST00000372276 SOX1O00570 391 aaPredicted RBP16.88■□□□□ 0.29
CD40-201ENST00000372276 KLF4O43474 513 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 STX11O75558 287 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 TNFP01375 233 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 ATP1B1P05026 303 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 COL9A1P20849 921 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 GALP22466 123 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 SOX3P41225 446 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 DGKEP52429 567 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 PDX1P52945 283 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 CBX3Q13185 183 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 SOWAHCQ53LP3 525 aaPredicted RBP16.88■□□□□ 0.29
CD40-201ENST00000372276 EXOSC6Q5RKV6 272 aaKnown RBP16.88■□□□□ 0.29
CD40-201ENST00000372276 ZNF619Q8N2I2 560 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 POGLUT1Q8NBL1 392 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 PSD4Q8NDX1 1056 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 SLC25A46Q96AG3 418 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 KCTD7Q96MP8 289 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 GPA33Q99795 319 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 RPP25Q9BUL9 199 aaKnown RBP16.88■□□□□ 0.29
CD40-201ENST00000372276 RNF167Q9H6Y7 350 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 SLC28A3Q9HAS3 691 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 KIR2DS5A0A0G2JLQ3 304 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 A0A0G2JNG1 304 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 TRAPPC13A5PLN9 417 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 KIR2DS3K7RE56 304 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 SNRNP200O75643 2136 aaKnown RBP16.88■□□□□ 0.29
CD40-201ENST00000372276 RASGRP1O95267 797 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 EGFP01133 1207 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 AK4P27144 223 aaPredicted RBP16.88■□□□□ 0.29
CD40-201ENST00000372276 FGF9P31371 208 aaPredicted RBP16.88■□□□□ 0.29
CD40-201ENST00000372276 RPS19P39019 145 aaKnown RBP16.88■□□□□ 0.29
CD40-201ENST00000372276 RABIFP47224 123 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 AVPR1BP47901 424 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 SLC9A3P48764 834 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 CLDN2P57739 230 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 KIR2DS5Q14953 304 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 ZNF628Q5EBL2 1059 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 C6orf132Q5T0Z8 1188 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 NXNL2Q5VZ03 156 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 TYW3Q6IPR3 259 aaKnown RBP16.88■□□□□ 0.29
CD40-201ENST00000372276 TMPRSS11AQ6ZMR5 421 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 RD3Q7Z3Z2 195 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 GDF7Q7Z4P5 450 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 EGFL6Q8IUX8 553 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 GID4Q8IVV7 300 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 SLC43A2Q8N370 569 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 OR2T33Q8NG76 320 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 SLC9A6Q92581 669 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 TXNDC15Q96J42 360 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 MRGPRX1Q96LB2 322 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 NECTIN4Q96NY8 510 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 NELL2Q99435 816 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 SDF2Q99470 211 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 GSDMCQ9BYG8 508 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 ZNF350Q9GZX5 532 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 FN3KQ9H479 309 aa16.88■□□□□ 0.29
CD40-201ENST00000372276 TMEM5Q9Y2B1 443 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms