RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 SLC16A1P53985 500 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 TAS2R38P59533 333 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 TPBGQ13641 420 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 YIF1BQ5BJH7 314 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 C6orf132Q5T0Z8 1188 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 PPP2R2DQ66LE6 453 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 CPOQ8IVL8 374 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 BMPERQ8N8U9 685 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 RNF32Q9H0A6 362 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 ENKD1Q9H0I2 346 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 PPP1R3EQ9H7J1 279 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 ZFR2Q9UPR6 939 aaKnown RBP18.61■□□□□ 0.57
CRLF3-201ENST00000324238 CENPVL1A0A0U1RR11 272 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 A0A1W2PPK0 400 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 LRIT2A6NDA9 550 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 LYRM1O43325 122 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 BCL6P41182 706 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 P2RY2P41231 377 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 IL12RB1P42701 662 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 MAPK9P45984 424 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 RPS5P46782 204 aaKnown RBP18.6■□□□□ 0.57
CRLF3-201ENST00000324238 AGFG1P52594 562 aaKnown RBP18.6■□□□□ 0.57
CRLF3-201ENST00000324238 ZNF155Q12901 538 aaPredicted RBP18.6■□□□□ 0.57
CRLF3-201ENST00000324238 FAM92BQ6ZTR7 304 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 OR5K2Q8NHB8 316 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 SUN3Q8TAQ9 357 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 SPPL3Q8TCT6 385 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 HSPB11Q9Y547 144 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 COL4A3Q01955 1670 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 ZIC2O95409 532 aaPredicted RBP18.6■□□□□ 0.57
CRLF3-201ENST00000324238 CHRNB1P11230 501 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 RAB40BQ12829 278 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 COX10Q12887 443 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 CCNJQ5T5M9 372 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 TIGD4Q8IY51 512 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 SIRT6Q8N6T7 355 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 FAM181AQ8N9Y4 354 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 TRIM45Q9H8W5 580 aaPredicted RBP18.6■□□□□ 0.57
CRLF3-201ENST00000324238 GRXCR1A8MXD5 290 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 CDC42EP2O14613 210 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 REM1O75628 298 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 THY1P04216 161 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 ALPPP05187 535 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 MRPL3P09001 348 aaKnown RBP18.6■□□□□ 0.57
CRLF3-201ENST00000324238 ELK1P19419 428 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 EPHA5P54756 1037 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 KRT33BQ14525 404 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 HNRNPA1L2Q32P51 320 aaKnown RBP18.6■□□□□ 0.57
CRLF3-201ENST00000324238 GANCQ8TET4 914 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 SMG7Q92540 1137 aaKnown RBP18.6■□□□□ 0.57
CRLF3-201ENST00000324238 SAMD8Q96LT4 415 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 INSM2Q96T92 566 aaPredicted RBP18.6■□□□□ 0.57
CRLF3-201ENST00000324238 TMEM245Q9H330 911 aa18.6■□□□□ 0.57
CRLF3-201ENST00000324238 ACADMP11310 421 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 NTSP30990 170 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 GABRA5P31644 462 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 FAPQ12884 760 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 MLF2Q15773 248 aaPredicted RBP18.59■□□□□ 0.57
CRLF3-201ENST00000324238 ENTPD8Q5MY95 495 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 PCNPQ8WW12 178 aaKnown RBP18.59■□□□□ 0.57
CRLF3-201ENST00000324238 DEDD2Q8WXF8 326 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 SLC38A2Q96QD8 506 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 MENTQ9BUN1 341 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 PTGFRNQ9P2B2 879 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 SERGEFQ9UGK8 458 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 TRAV6A0A075B6T7 132 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 MAN2B1O00754 1011 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 SYPP08247 313 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 SLC35G4P0C7Q5 338 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 SRP9P49458 86 aaKnown RBP18.59■□□□□ 0.57
CRLF3-201ENST00000324238 OR10A3P58181 314 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 ID2Q02363 134 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 KLHL12Q53G59 568 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 PLBD1Q6P4A8 553 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 KIAA0907Q7Z7F0 614 aaPredicted RBP18.59■□□□□ 0.57
CRLF3-201ENST00000324238 SYT9Q86SS6 491 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 RASSF5Q8WWW0 418 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 SUSD6Q92537 303 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 OR7D2Q96RA2 312 aa18.59■□□□□ 0.57
CRLF3-201ENST00000324238 A0A0A6YYD5 115 aa18.58■□□□□ 0.57
CRLF3-201ENST00000324238 AIFM1O95831 613 aa18.58■□□□□ 0.57
CRLF3-201ENST00000324238 FRKP42685 505 aaPredicted RBP18.58■□□□□ 0.57
CRLF3-201ENST00000324238 PDX1P52945 283 aa18.58■□□□□ 0.57
CRLF3-201ENST00000324238 REEP5Q00765 189 aa18.58■□□□□ 0.57
CRLF3-201ENST00000324238 MINDY4Q4G0A6 757 aa18.58■□□□□ 0.57
CRLF3-201ENST00000324238 FAM78AQ5JUQ0 283 aa18.58■□□□□ 0.57
CRLF3-201ENST00000324238 VASNQ6EMK4 673 aa18.58■□□□□ 0.57
CRLF3-201ENST00000324238 ERN2Q76MJ5 926 aaKnown RBP18.58■□□□□ 0.57
CRLF3-201ENST00000324238 ACOT4Q8N9L9 421 aa18.58■□□□□ 0.57
CRLF3-201ENST00000324238 HCAR1Q9BXC0 346 aa18.58■□□□□ 0.57
CRLF3-201ENST00000324238 SLC6A17Q9H1V8 727 aa18.58■□□□□ 0.57
CRLF3-201ENST00000324238 SLC38A1Q9H2H9 487 aa18.58■□□□□ 0.57
CRLF3-201ENST00000324238 HINT3Q9NQE9 182 aaKnown RBP18.58■□□□□ 0.57
CRLF3-201ENST00000324238 EXTL2Q9UBQ6 330 aa18.58■□□□□ 0.57
CRLF3-201ENST00000324238 INSL6Q9Y581 213 aa18.58■□□□□ 0.57
CRLF3-201ENST00000324238 NPIPA5A0A0B4J1W7 369 aa18.58■□□□□ 0.56
CRLF3-201ENST00000324238 TMEM129A0AVI4 362 aa18.58■□□□□ 0.56
CRLF3-201ENST00000324238 NPIPA7E9PJI5 369 aa18.58■□□□□ 0.56
CRLF3-201ENST00000324238 MAGEB4O15481 346 aaPredicted RBP18.58■□□□□ 0.56
CRLF3-201ENST00000324238 NPIPA8P0DM63 369 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms