RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 NCDNQ9UBB6 729 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 IFT52Q9Y366 437 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 CLCA3PQ9Y6N3 262 aa16.42■□□□□ 0.22
SHKBP1-224ENST00000600718 ADAMDEC1O15204 470 aa16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 PABPC4LP0CB38 370 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 CCL4P13236 92 aa16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 FPR1P21462 350 aa16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 DAG1Q14118 895 aa16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 ZNF311Q5JNZ3 666 aa16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 TYW3Q6IPR3 259 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 TMEM179BQ7Z7N9 219 aa16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 PRSS58Q8IYP2 241 aa16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 DRAXINQ8NBI3 349 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 MAGEE2Q8TD90 523 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 PIK3R3Q92569 461 aa16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 FBXL20Q96IG2 436 aa16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 EPYCQ99645 322 aa16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 STRADBQ9C0K7 418 aa16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 ZNF350Q9GZX5 532 aa16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 CACYBPQ9HB71 228 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 VNN3Q9NY84 501 aa16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 ZNF232Q9UNY5 417 aa16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 SAMHD1Q9Y3Z3 626 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-224ENST00000600718 MEN1O00255 615 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 DENRO43583 198 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 RFPL3O75679 317 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 DNAJB5O75953 348 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 LGI1O95970 557 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 HPRP00739 348 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 ALBP02768 609 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 GUSBP08236 651 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 RHCEP18577 417 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 AGXTP21549 392 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 ALDH3A2P51648 485 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 EFNA3P52797 238 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 PSG6Q00889 435 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 CARM1Q86X55 608 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 RNF31Q96EP0 1072 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 PIP5K1AQ99755 562 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 OSBPL10Q9BXB5 764 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 SLC39A1Q9NY26 324 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 USE1Q9NZ43 259 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 MKLN1Q9UL63 735 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 U3KQV3 271 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 RALGAPA1Q6GYQ0 2036 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 VSTM2BA6NLU5 285 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 A8MUA0 341 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 SYT5O00445 386 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 ZIC2O95409 532 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 LYNP07948 512 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 MED21Q13503 144 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 DHRS4L2Q6PKH6 230 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 PEX5LQ8IYB4 626 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 ZNF619Q8N2I2 560 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 OR52P1PQ8NH57 321 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 OR14A16Q8NHC5 309 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 C16orf52Q8NHV5 167 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 DAZLQ92904 295 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 FKBP10Q96AY3 582 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 ZG16BQ96DA0 208 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 ART5Q96L15 291 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 LRFN5Q96NI6 719 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 RBM4BQ9BQ04 359 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 RBM4Q9BWF3 364 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 COL25A1Q9BXS0 654 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 CFL2Q9Y281 166 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 SLC9A8Q9Y2E8 581 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 MAGED1Q9Y5V3 778 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 AP4B1Q9Y6B7 739 aa16.4■□□□□ 0.22
SHKBP1-224ENST00000600718 GXYLT2A0PJZ3 443 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 CLPSP04118 112 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 ALPLP05186 524 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 HEXBP07686 556 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 PRKAR1BP31321 381 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 RRM2P31350 389 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 TRHRP34981 398 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 SH3BGRP55822 239 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 PPP1R8Q12972 351 aaKnown RBP16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 GK3PQ14409 553 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 CCDC157Q569K6 752 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 NHSL2Q5HYW2 709 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 CCNJQ5T5M9 372 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 SLC46A1Q96NT5 459 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 LRFN3Q9BTN0 628 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 QRSL1Q9H0R6 528 aaKnown RBP16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 IRF2BPLQ9H1B7 796 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 SLC26A1Q9H2B4 701 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 Q9N2J8 555 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 VCX3AQ9NNX9 186 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 PARD6AQ9NPB6 346 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 SMPD3Q9NY59 655 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 SLC13A4Q9UKG4 626 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 PCDHGA1Q9Y5H4 931 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 NUP210LQ5VU65 1888 aa16.39■□□□□ 0.21
SHKBP1-224ENST00000600718 DLGAP1O14490 977 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 GDF9O60383 454 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 KCNK2O95069 426 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 DDAH2O95865 285 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 KLK3P07288 261 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 SLC37A1P57057 533 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms