RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 SULT1A4P0DMN0 295 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 VIPR1P32241 457 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 BMP8BP34820 402 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 MMP12P39900 470 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 NNMTP40261 264 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 PCBP4P57723 403 aaKnown RBP16.54■□□□□ 0.24
RAB40C-205ENST00000539661 ZNF322Q6U7Q0 402 aaPredicted RBP16.54■□□□□ 0.24
RAB40C-205ENST00000539661 RTL4Q6ZR62 310 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 BMP8AQ7Z5Y6 402 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 FGD2Q7Z6J4 655 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 CPXM2Q8N436 756 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 LILRA3Q8N6C8 439 aaPredicted RBP16.54■□□□□ 0.24
RAB40C-205ENST00000539661 RASGEF1AQ8N9B8 481 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 OR8D4Q8NGM9 314 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 OR8K5Q8NH50 307 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 SMG9Q9H0W8 520 aaKnown RBP16.54■□□□□ 0.24
RAB40C-205ENST00000539661 PTGFRNQ9P2B2 879 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 LSM7Q9UK45 103 aaKnown RBP16.54■□□□□ 0.24
RAB40C-205ENST00000539661 CLEC4EQ9ULY5 219 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 RNF13O43567 381 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 ALDH1A1P00352 501 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 EIF4EP06730 217 aaKnown RBP16.54■□□□□ 0.24
RAB40C-205ENST00000539661 RPL17P18621 184 aaKnown RBP16.54■□□□□ 0.24
RAB40C-205ENST00000539661 ZNF81P51508 661 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 CTSCP53634 463 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 HENMT1Q5T8I9 393 aaKnown RBP16.54■□□□□ 0.24
RAB40C-205ENST00000539661 PLEKHM3Q6ZWE6 761 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 HSD11B1LQ7Z5J1 315 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 COMTD1Q86VU5 262 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 TMEM173Q86WV6 379 aaPredicted RBP16.54■□□□□ 0.24
RAB40C-205ENST00000539661 LSM14AQ8ND56 463 aaKnown RBP16.54■□□□□ 0.24
RAB40C-205ENST00000539661 OR4F15Q8NGB8 312 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 BBS10Q8TAM1 723 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 ZNF764Q96H86 408 aaPredicted RBP16.54■□□□□ 0.24
RAB40C-205ENST00000539661 ZNF578Q96N58 590 aaPredicted RBP16.54■□□□□ 0.24
RAB40C-205ENST00000539661 SLC22A12Q96S37 553 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 C7orf50Q9BRJ6 194 aaKnown RBP16.54■□□□□ 0.24
RAB40C-205ENST00000539661 ZNF275Q9NSD4 429 aaPredicted RBP16.54■□□□□ 0.24
RAB40C-205ENST00000539661 UCKL1Q9NWZ5 548 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 MAB21L2Q9Y586 359 aa16.54■□□□□ 0.24
RAB40C-205ENST00000539661 EEF1E1O43324 174 aaKnown RBP16.53■□□□□ 0.24
RAB40C-205ENST00000539661 ACP5P13686 325 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 CXCL3P19876 107 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 DNASE1P24855 282 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 HTR1FP30939 366 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 CTSOP43234 321 aaPredicted RBP16.53■□□□□ 0.24
RAB40C-205ENST00000539661 EPHA4P54764 986 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 INSL4Q14641 139 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 SYPL1Q16563 259 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 LRRC73Q5JTD7 316 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 CCSAPQ6IQ19 270 aaPredicted RBP16.53■□□□□ 0.24
RAB40C-205ENST00000539661 GET4Q7L5D6 327 aaPredicted RBP16.53■□□□□ 0.24
RAB40C-205ENST00000539661 GPR135Q8IZ08 494 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 OR6T1Q8NGN1 323 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 CAMK1GQ96NX5 476 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 RBP7Q96R05 134 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 EMC3Q9P0I2 261 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 YIPF1Q9Y548 306 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 MPC2O95563 127 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 UGT2B7P16662 529 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 PUDPQ08623 228 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 ZNF791Q3KP31 576 aaPredicted RBP16.53■□□□□ 0.24
RAB40C-205ENST00000539661 SLC36A2Q495M3 483 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 SMARCD3Q6STE5 483 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 NR2C2APQ86WQ0 139 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 GJD3Q8N144 294 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 GSX2Q9BZM3 304 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 BCL2L10Q9HD36 194 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 TNFRSF10DQ9UBN6 386 aa16.53■□□□□ 0.24
RAB40C-205ENST00000539661 ZFR2Q9UPR6 939 aaKnown RBP16.53■□□□□ 0.24
RAB40C-205ENST00000539661 A0A087WUU8 490 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 GPR171O14626 319 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 SOX30O94993 753 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 OLFM2O95897 454 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 NR2F1P10589 423 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 CTSAP10619 480 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 PDHA2P29803 388 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 THBS2P35442 1172 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 ETV3P41162 512 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 CCT3P49368 545 aaKnown RBP16.52■□□□□ 0.24
RAB40C-205ENST00000539661 LSM11P83369 360 aaKnown RBP eCLIP16.52■□□□□ 0.24
RAB40C-205ENST00000539661 HSPB3Q12988 150 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 TSTA3Q13630 321 aaPredicted RBP16.52■□□□□ 0.24
RAB40C-205ENST00000539661 Q6ZVL8 140 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 KRT74Q7RTS7 529 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 TMEM150AQ86TG1 271 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 TPRA1Q86W33 373 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 KLBQ86Z14 1044 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 SAMD12Q8N8I0 201 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 OR9A1PQ8NGU1 263 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 CD99L2Q8TCZ2 262 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 SETD7Q8WTS6 366 aaKnown RBP16.52■□□□□ 0.24
RAB40C-205ENST00000539661 HSD17B8Q92506 261 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 OSTF1Q92882 214 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 RBPMSQ93062 196 aaKnown RBP16.52■□□□□ 0.24
RAB40C-205ENST00000539661 TM4SF18Q96CE8 201 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 RIOK2Q9BVS4 552 aaKnown RBP16.52■□□□□ 0.24
RAB40C-205ENST00000539661 B3GNT4Q9C0J1 378 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 ACTR6Q9GZN1 396 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 SERHL2Q9H4I8 314 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms