RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 SGMS2Q8NHU3 365 aa7.97□□□□□ -1.13
PVT1-207ENST00000518528 ANKRD49Q8WVL7 239 aa7.97□□□□□ -1.13
PVT1-207ENST00000518528 FAM168AQ92567 244 aa7.97□□□□□ -1.13
PVT1-207ENST00000518528 PROX1Q92786 737 aa7.97□□□□□ -1.13
PVT1-207ENST00000518528 S100PBPQ96BU1 408 aa7.97□□□□□ -1.13
PVT1-207ENST00000518528 SLC35A4Q96G79 324 aa7.97□□□□□ -1.13
PVT1-207ENST00000518528 ADOQ96SZ5 270 aa7.97□□□□□ -1.13
PVT1-207ENST00000518528 NAP1L3Q99457 506 aaPredicted RBP7.97□□□□□ -1.13
PVT1-207ENST00000518528 C12orf65Q9H3J6 166 aaKnown RBP7.97□□□□□ -1.13
PVT1-207ENST00000518528 DSN1Q9H410 356 aa7.97□□□□□ -1.13
PVT1-207ENST00000518528 NSMCE4AQ9NXX6 385 aa7.97□□□□□ -1.13
PVT1-207ENST00000518528 CISD1Q9NZ45 108 aaKnown RBP7.97□□□□□ -1.13
PVT1-207ENST00000518528 MOCS1Q9NZB8 636 aa7.97□□□□□ -1.13
PVT1-207ENST00000518528 AHSPQ9NZD4 102 aa7.97□□□□□ -1.13
PVT1-207ENST00000518528 ZNF337Q9Y3M9 751 aa7.97□□□□□ -1.13
PVT1-207ENST00000518528 TSC22D4Q9Y3Q8 395 aa7.97□□□□□ -1.13
PVT1-207ENST00000518528 NCKAP5O14513 1909 aa7.97□□□□□ -1.13
PVT1-207ENST00000518528 A0A096LNT2 108 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 LOC100289279A0A1B0GTE1 492 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 H0YC42 278 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 K7EPI3 171 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 KIAA0513O60268 411 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 AQP8O94778 261 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 TUBBP07437 444 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 PABPC4LP0CB38 370 aaKnown RBP7.96□□□□□ -1.14
PVT1-207ENST00000518528 CCDC166P0CW27 439 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 IGHV4-31P0DP07 118 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 BMP4P12644 408 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 EPORP19235 508 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 CSNK2A2P19784 350 aaPredicted RBP7.96□□□□□ -1.14
PVT1-207ENST00000518528 S1PR1P21453 382 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 CFPP27918 469 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 BSGP35613 385 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 EIF1AXP47813 144 aaKnown RBP7.96□□□□□ -1.14
PVT1-207ENST00000518528 CLK3P49761 638 aaKnown RBP7.96□□□□□ -1.14
PVT1-207ENST00000518528 SUCLG1P53597 346 aaKnown RBP7.96□□□□□ -1.14
PVT1-207ENST00000518528 CDH11P55287 796 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 TPD52P55327 224 aaPredicted RBP7.96□□□□□ -1.14
PVT1-207ENST00000518528 CLDN20P56880 219 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 LSM11P83369 360 aaKnown RBP eCLIP7.96□□□□□ -1.14
PVT1-207ENST00000518528 EXOSC7Q15024 291 aaKnown RBP7.96□□□□□ -1.14
PVT1-207ENST00000518528 PPP1R7Q15435 360 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 FAM120AOSQ5T036 256 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 RNASEH2BQ5TBB1 312 aaKnown RBP7.96□□□□□ -1.14
PVT1-207ENST00000518528 LIPJQ5W064 366 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 TTC27Q6P3X3 843 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 CCDC137Q6PK04 289 aaKnown RBP7.96□□□□□ -1.14
PVT1-207ENST00000518528 PAGE2Q7Z2X7 111 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 MEX3DQ86XN8 651 aaKnown RBP7.96□□□□□ -1.14
PVT1-207ENST00000518528 OR52B6Q8NGF0 335 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 OR52R1Q8NGF1 315 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 EXT2Q93063 718 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 RADILQ96JH8 1075 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 SERPINI1Q99574 410 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 TRIM2Q9C040 744 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 RHOJQ9H4E5 214 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 CHODLQ9H9P2 273 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 SMYD2Q9NRG4 433 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 XPR1Q9UBH6 696 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 CLEC4AQ9UMR7 237 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 B3GALT5Q9Y2C3 310 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 PLLPQ9Y342 182 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 MED12LQ86YW9 2145 aa7.96□□□□□ -1.14
PVT1-207ENST00000518528 OR2M5A3KFT3 312 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 FOXE1O00358 373 aaPredicted RBP7.95□□□□□ -1.14
PVT1-207ENST00000518528 BANF1O75531 89 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 SEMA3DO95025 777 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 CD8AP01732 235 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 ATP1B1P05026 303 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 IGFBP5P24593 272 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 PNLIPRP2P54317 469 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 BSPH1Q075Z2 132 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 ZNF844Q08AG5 666 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 FRG1Q14331 258 aaKnown RBP7.95□□□□□ -1.14
PVT1-207ENST00000518528 ERCC6LQ2NKX8 1250 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 PRICKLE4Q2TBC4 344 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 CCNYL2Q5T2Q4 361 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 PDSS1Q5T2R2 415 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 TRMT10BQ6PF06 316 aaKnown RBP7.95□□□□□ -1.14
PVT1-207ENST00000518528 FIGNL1Q6PIW4 674 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 FAM111BQ6SJ93 734 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 CCDC25Q86WR0 208 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 WDR75Q8IWA0 830 aaKnown RBP7.95□□□□□ -1.14
PVT1-207ENST00000518528 RNF175Q8N4F7 328 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 SPATA6LQ8N4H0 392 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 ARIH2OSQ8N7S6 290 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 FADS6Q8N9I5 356 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 KBTBD8Q8NFY9 601 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 STAG3L4Q8TBR4 150 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 PIWIL2Q8TC59 973 aaKnown RBP7.95□□□□□ -1.14
PVT1-207ENST00000518528 NEUROG1Q92886 237 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 KISS1RQ969F8 398 aaPredicted RBP7.95□□□□□ -1.14
PVT1-207ENST00000518528 LRRC39Q96DD0 335 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 MUCL1Q96DR8 90 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 REXO5Q96IC2 774 aaKnown RBP7.95□□□□□ -1.14
PVT1-207ENST00000518528 BTBD9Q96Q07 612 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 CACNG6Q9BXT2 260 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 POTEKPQ9BYX7 375 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 ADAM19Q9H013 955 aa7.95□□□□□ -1.14
PVT1-207ENST00000518528 DDX47Q9H0S4 455 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms