RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 CLEC2AQ6UVW9 174 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 LARP4Q71RC2 724 aaKnown RBP eCLIP11.26□□□□□ -0.61
DDX41-215ENST00000512431 ROBO4Q8WZ75 1007 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 C11orf24Q96F05 449 aaPredicted RBP11.26□□□□□ -0.61
DDX41-215ENST00000512431 GMPPAQ96IJ6 420 aaPredicted RBP11.26□□□□□ -0.61
DDX41-215ENST00000512431 SERPINI1Q99574 410 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 HDHD5Q9BXW7 423 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 DSN1Q9H410 356 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 SMYD2Q9NRG4 433 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 MOCS1Q9NZB8 636 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 AHSPQ9NZD4 102 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 MAT2BQ9NZL9 334 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 WHRNQ9P202 907 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 GDF2Q9UK05 429 aaPredicted RBP11.26□□□□□ -0.61
DDX41-215ENST00000512431 MTO1Q9Y2Z2 717 aaKnown RBP11.26□□□□□ -0.61
DDX41-215ENST00000512431 TEX264Q9Y6I9 313 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 CR1P17927 2039 aa11.26□□□□□ -0.61
DDX41-215ENST00000512431 ABCA1O95477 2261 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 EXPH5Q8NEV8 1989 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 FAM234BA2RU67 622 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 PGRMC1O00264 195 aaKnown RBP11.25□□□□□ -0.61
DDX41-215ENST00000512431 FOXE1O00358 373 aaPredicted RBP11.25□□□□□ -0.61
DDX41-215ENST00000512431 NDUFS7O75251 213 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 BCAS2O75934 225 aaPredicted RBP11.25□□□□□ -0.61
DDX41-215ENST00000512431 AQP8O94778 261 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 KLK1P06870 262 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 PSMB1P20618 241 aaKnown RBP11.25□□□□□ -0.61
DDX41-215ENST00000512431 FEN1P39748 380 aaKnown RBP11.25□□□□□ -0.61
DDX41-215ENST00000512431 PNLIPRP2P54317 469 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 CLDN20P56880 219 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 VLDLRP98155 873 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 MGAT2Q10469 447 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 MORF4L2Q15014 288 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 CPSF6Q16630 551 aaKnown RBP eCLIP11.25□□□□□ -0.61
DDX41-215ENST00000512431 CTU2Q2VPK5 515 aaKnown RBP11.25□□□□□ -0.61
DDX41-215ENST00000512431 ZNF672Q499Z4 452 aaPredicted RBP11.25□□□□□ -0.61
DDX41-215ENST00000512431 NCMAPQ5T1S8 102 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 CCNYL2Q5T2Q4 361 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 CYB5R2Q6BCY4 276 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 DNAJC14Q6Y2X3 702 aaPredicted RBP11.25□□□□□ -0.61
DDX41-215ENST00000512431 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.25□□□□□ -0.61
DDX41-215ENST00000512431 PAGE2Q7Z2X7 111 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 ANKMY2Q8IV38 441 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 METTL25Q8N6Q8 603 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 ADAD1Q96M93 576 aaKnown RBP11.25□□□□□ -0.61
DDX41-215ENST00000512431 ALG9Q9H6U8 611 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 GLRX2Q9NS18 164 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 PAQR5Q9NXK6 330 aaPredicted RBP11.25□□□□□ -0.61
DDX41-215ENST00000512431 ZNF639Q9UID6 485 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 CLEC4AQ9UMR7 237 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 GPR55Q9Y2T6 319 aaPredicted RBP11.25□□□□□ -0.61
DDX41-215ENST00000512431 AP4B1Q9Y6B7 739 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 ZNF780BQ9Y6R6 833 aa11.25□□□□□ -0.61
DDX41-215ENST00000512431 IGHV4-30-2A0A087WSY4 118 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 C1orf226A1L170 272 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 OR2M5A3KFT3 312 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 GOLGA6L6A8MZA4 724 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 TSPAN2O60636 221 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 LMX1BO60663 402 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 UGDHO60701 494 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 SS18L1O75177 396 aaPredicted RBP11.24□□□□□ -0.61
DDX41-215ENST00000512431 SEMA3DO95025 777 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 WISP3O95389 354 aaPredicted RBP11.24□□□□□ -0.61
DDX41-215ENST00000512431 CBX7O95931 251 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 EIF1AXP47813 144 aaKnown RBP11.24□□□□□ -0.61
DDX41-215ENST00000512431 EMDP50402 254 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 MAPK12P53778 367 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 ARL4CP56559 192 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 GPX6P59796 221 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 LOXL1Q08397 574 aaPredicted RBP11.24□□□□□ -0.61
DDX41-215ENST00000512431 TRMT12Q53H54 448 aaKnown RBP11.24□□□□□ -0.61
DDX41-215ENST00000512431 GTF2IRD2BQ6EKJ0 949 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 SLC48A1Q6P1K1 146 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 GTF2IRD2Q86UP8 949 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 SPC24Q8NBT2 197 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 OR2M3Q8NG83 312 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 OR5M1Q8NGP8 315 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 UBTD2Q8WUN7 234 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 S100PBPQ96BU1 408 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 TRAF4Q9BUZ4 470 aaPredicted RBP11.24□□□□□ -0.61
DDX41-215ENST00000512431 ADAM29Q9UKF5 820 aa11.24□□□□□ -0.61
DDX41-215ENST00000512431 MCTS1Q9ULC4 181 aaKnown RBP11.24□□□□□ -0.61
DDX41-215ENST00000512431 UBXN8O00124 270 aa11.23□□□□□ -0.61
DDX41-215ENST00000512431 EIF1AYO14602 144 aaKnown RBP11.23□□□□□ -0.61
DDX41-215ENST00000512431 SPRY1O43609 319 aaPredicted RBP11.23□□□□□ -0.61
DDX41-215ENST00000512431 SCO2O43819 266 aa11.23□□□□□ -0.61
DDX41-215ENST00000512431 SYNGR4O95473 234 aa11.23□□□□□ -0.61
DDX41-215ENST00000512431 THBS1P07996 1170 aa11.23□□□□□ -0.61
DDX41-215ENST00000512431 SLC25A16P16260 332 aa11.23□□□□□ -0.61
DDX41-215ENST00000512431 HNF1AP20823 631 aa11.23□□□□□ -0.61
DDX41-215ENST00000512431 IL32P24001 234 aa11.23□□□□□ -0.61
DDX41-215ENST00000512431 ARL1P40616 181 aaPredicted RBP11.23□□□□□ -0.61
DDX41-215ENST00000512431 CLK3P49761 638 aaKnown RBP11.23□□□□□ -0.61
DDX41-215ENST00000512431 GAS1P54826 345 aa11.23□□□□□ -0.61
DDX41-215ENST00000512431 RAB10P61026 200 aa11.23□□□□□ -0.61
DDX41-215ENST00000512431 SRSF2Q01130 221 aaKnown RBP11.23□□□□□ -0.61
DDX41-215ENST00000512431 PGGHGQ32M88 737 aa11.23□□□□□ -0.61
DDX41-215ENST00000512431 GLYR1Q49A26 553 aaPredicted RBP11.23□□□□□ -0.61
DDX41-215ENST00000512431 ZNF662Q6ZS27 426 aa11.23□□□□□ -0.61
DDX41-215ENST00000512431 RAPH1Q70E73 1250 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms