RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CHST10O43529 356 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 SEMA7AO75326 666 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 MT-ND4P03905 459 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 ZNF30P17039 623 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 DNASE1P24855 282 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 AP2S1P53680 142 aaPredicted RBP11.96□□□□□ -0.49
VPS52-218ENST00000482399 CHRNEQ04844 493 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 TEAD2Q15562 447 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 LIPIQ6XZB0 460 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 LINGO2Q7L985 606 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 AMZ2Q86W34 360 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 PLCZ1Q86YW0 608 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 RDH10Q8IZV5 341 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 OR52L1Q8NGH7 329 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 OR2T35Q8NGX2 323 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 GCDHQ92947 438 aaPredicted RBP11.96□□□□□ -0.49
VPS52-218ENST00000482399 HYLS1Q96M11 299 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 ISG20L2Q9H9L3 353 aaKnown RBP11.96□□□□□ -0.49
VPS52-218ENST00000482399 ADAP2Q9NPF8 381 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 WSB2Q9NYS7 404 aaPredicted RBP11.96□□□□□ -0.49
VPS52-218ENST00000482399 SCN3AQ9NY46 2000 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 PTPRDP23468 1912 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.96□□□□□ -0.49
VPS52-218ENST00000482399 TMPRSS11DO60235 418 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 HCN1O60741 890 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 SOD2P04179 222 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 ACP2P11117 423 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 TRIM23P36406 574 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 GPR176Q14439 515 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 PRSS45Q7RTY3 260 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 TMEM150AQ86TG1 271 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 OR4M1Q8NGD0 313 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 ZCCHC10Q8TBK6 192 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 CD99L2Q8TCZ2 262 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 GRHL3Q8TE85 626 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 FAIM2Q9BWQ8 316 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 C1QTNF6Q9BXI9 259 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 NARFLQ9H6Q4 476 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 KCNK6Q9Y257 313 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 OTOFQ9HC10 1997 aa11.96□□□□□ -0.49
VPS52-218ENST00000482399 DICER1Q9UPY3 1922 aaKnown RBP11.96□□□□□ -0.5
VPS52-218ENST00000482399 NPIPA5A0A0B4J1W7 369 aa11.96□□□□□ -0.5
VPS52-218ENST00000482399 NPIPA7E9PJI5 369 aa11.96□□□□□ -0.5
VPS52-218ENST00000482399 NDUFS4O43181 175 aa11.96□□□□□ -0.5
VPS52-218ENST00000482399 CXCL14O95715 111 aa11.96□□□□□ -0.5
VPS52-218ENST00000482399 ALPPP05187 535 aa11.96□□□□□ -0.5
VPS52-218ENST00000482399 NPIPA8P0DM63 369 aa11.96□□□□□ -0.5
VPS52-218ENST00000482399 ENDOUP21128 410 aaKnown RBP11.96□□□□□ -0.5
VPS52-218ENST00000482399 GLYR1Q49A26 553 aaPredicted RBP11.96□□□□□ -0.5
VPS52-218ENST00000482399 CCNJQ5T5M9 372 aa11.96□□□□□ -0.5
VPS52-218ENST00000482399 TPGS2Q68CL5 300 aa11.96□□□□□ -0.5
VPS52-218ENST00000482399 NKAIN4Q8IVV8 208 aa11.96□□□□□ -0.5
VPS52-218ENST00000482399 KCT2Q8NC54 265 aa11.96□□□□□ -0.5
VPS52-218ENST00000482399 ZNF689Q96CS4 500 aaPredicted RBP11.96□□□□□ -0.5
VPS52-218ENST00000482399 CXorf40BQ96DE9 158 aa11.96□□□□□ -0.5
VPS52-218ENST00000482399 VN1R3Q9BXE9 311 aa11.96□□□□□ -0.5
VPS52-218ENST00000482399 DPH1Q9BZG8 443 aa11.96□□□□□ -0.5
VPS52-218ENST00000482399 KCNN2Q9H2S1 579 aa11.96□□□□□ -0.5
VPS52-218ENST00000482399 RETREG1Q9H6L5 497 aa11.96□□□□□ -0.5
VPS52-218ENST00000482399 SLC25A19Q9HC21 320 aa11.96□□□□□ -0.5
VPS52-218ENST00000482399 EXOSC1Q9Y3B2 195 aaKnown RBP11.96□□□□□ -0.5
VPS52-218ENST00000482399 MID1O15344 667 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 PIP5K1CO60331 668 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 GKN3PP0CG01 181 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 PCSK2P16519 638 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 GABRA5P31644 462 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 SREBF2Q12772 1141 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 MTSS1LQ765P7 747 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 TMEM163Q8TC26 289 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 RGMAQ96B86 450 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 NUS1Q96E22 293 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 POLDIP3Q9BY77 421 aaKnown RBP11.95□□□□□ -0.5
VPS52-218ENST00000482399 BTBD1Q9H0C5 482 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 DPAGT1Q9H3H5 408 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 HMX1Q9NP08 348 aaPredicted RBP11.95□□□□□ -0.5
VPS52-218ENST00000482399 URB1O60287 2271 aaKnown RBP11.95□□□□□ -0.5
VPS52-218ENST00000482399 A0A0A6YYJ9 748 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 A0A1W2PS29 197 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 LANCL1O43813 399 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 C1QBP02746 253 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 ANXA3P12429 323 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 CPEP16870 476 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 MC3RP41968 323 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 ANXA11P50995 505 aaKnown RBP11.95□□□□□ -0.5
VPS52-218ENST00000482399 CCR8P51685 355 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 SP3Q02447 781 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 OC90Q02509 493 aaPredicted RBP11.95□□□□□ -0.5
VPS52-218ENST00000482399 SF3A2Q15428 464 aaKnown RBP11.95□□□□□ -0.5
VPS52-218ENST00000482399 C11orf88Q6PI97 169 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 CXXC5Q7LFL8 322 aaKnown RBP11.95□□□□□ -0.5
VPS52-218ENST00000482399 GPR135Q8IZ08 494 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 OR13C5Q8NGS8 318 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 TRMT10AQ8TBZ6 339 aaKnown RBP11.95□□□□□ -0.5
VPS52-218ENST00000482399 IRF7Q92985 503 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 TM4SF18Q96CE8 201 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 DNAJA3Q96EY1 480 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 RBCK1Q9BYM8 510 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 OR6C2Q9NZP2 312 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 KLHL42Q9P2K6 505 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 GTF2A1LQ9UNN4 478 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms