RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 UBQLNLQ8IYU4 475 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 TEX9Q8N6V9 391 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 GOLGA6L1Q8N7Z2 621 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 GBP7Q8N8V2 638 aaPredicted RBP4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 ZNF610Q8N9Z0 462 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 FBXO36Q8NEA4 188 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 OR4K14Q8NGD5 310 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 FNDC9Q8TBE3 224 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 WDR20Q8TBZ3 569 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 RNF138Q8WVD3 245 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 EDARADDQ8WWZ3 215 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 AKAP1Q92667 903 aaKnown RBP eCLIP4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 TMBIM1Q969X1 311 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 ZBED6CLQ96FA7 236 aaPredicted RBP4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 TSPAN17Q96FV3 270 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 COL21A1Q96P44 957 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 ATOH8Q96SQ7 321 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 GPR22Q99680 433 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 PINK1Q9BXM7 581 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 BRINP2Q9C0B6 783 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 KLHL4Q9C0H6 718 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 DDX47Q9H0S4 455 aaKnown RBP4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 ALG9Q9H6U8 611 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 MAT2BQ9NZL9 334 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 ZNF639Q9UID6 485 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 DKKL1Q9UK85 242 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 CES1P1Q9UKY3 287 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 LAMP3Q9UQV4 416 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 CFL2Q9Y281 166 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 PLLPQ9Y342 182 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 ZNF175Q9Y473 711 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 JRKLQ9Y4A0 524 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 PLCE1Q9P212 2302 aa4.61□□□□□ -1.67
SNRNP40-204ENST00000474025 A8MV72 311 aaPredicted RBP4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 EFCAB8A8MWE9 144 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 CXorf49A8MYA2 514 aaPredicted RBP4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 SUPT3HB4E1H0 165 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 E7ESA3 106 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 FOXE1O00358 373 aaPredicted RBP4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 SEC14L5O43304 696 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 TSPAN2O60636 221 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 UGDHO60701 494 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 SUPT3HO75486 399 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 TNFRSF21O75509 655 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 AQP8O94778 261 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 SEC31AO94979 1220 aaKnown RBP4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 IGHV4-39P01824 125 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 SOD3P08294 240 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 DANCRP0C864 163 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 CT45A8P0DMV1 189 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 CT45A9P0DMV2 189 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 PEPDP12955 493 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 MTHFD2P13995 350 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 PPP3CBP16298 524 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 PCSK2P16519 638 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 STMN1P16949 149 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 DRD5P21918 477 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 ACVR1BP36896 505 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 FEN1P39748 380 aaKnown RBP4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 PPICP45877 212 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 EMDP50402 254 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 NEK2P51955 445 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 DSCR4P56555 118 aaPredicted RBP4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 ARL4CP56559 192 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 CLDN20P56880 219 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 GPX6P59796 221 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 PHEXP78562 749 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 ZNF844Q08AG5 666 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 MAP4K2Q12851 820 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 DLG1Q12959 904 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 PDIA2Q13087 525 aaKnown RBP4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 PON3Q15166 354 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 LTB4RQ15722 352 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 CPSF6Q16630 551 aaKnown RBP eCLIP4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 TSNAXIP1Q2TAA8 658 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 CT45A2Q5DJT8 189 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 C6orf52Q5T4I8 152 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 RAET1LQ5VY80 246 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 ADAM5Q6NVV9 412 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 SLC48A1Q6P1K1 146 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 NPSR1Q6W5P4 371 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 FAM214BQ7L5A3 538 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 CHMP1BQ7LBR1 199 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 CMC1Q7Z7K0 106 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 METTL25Q8N6Q8 603 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 FADS6Q8N9I5 356 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 ADCY4Q8NFM4 1077 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 OR4K17Q8NGC6 315 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 OR52R1Q8NGF1 315 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 OR6K3Q8NGY3 331 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 LILRB1Q8NHL6 650 aaPredicted RBP4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 RAB3IL1Q8TBN0 382 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 STAG3L4Q8TBR4 150 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 ACTRT1Q8TDG2 376 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 REPS1Q96D71 796 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 TMCO6Q96DC7 493 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 DTNBP1Q96EV8 351 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 SLC35A4Q96G79 324 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 PLPPR2Q96GM1 343 aa4.6□□□□□ -1.67
SNRNP40-204ENST00000474025 BTBD9Q96Q07 612 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms