RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 RABL2BQ9UNT1 228 aa3.86□□□□□ -1.79
GTF3C3-207ENST00000451088 TMED5Q9Y3A6 229 aa3.86□□□□□ -1.79
GTF3C3-207ENST00000451088 TTLL3Q9Y4R7 772 aa3.86□□□□□ -1.79
GTF3C3-207ENST00000451088 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.86□□□□□ -1.794e-9■■■■□ 19.9
GTF3C3-207ENST00000451088 DNHD1Q96M86 4753 aa3.86□□□□□ -1.79
GTF3C3-207ENST00000451088 NOTCH1P46531 2555 aa3.86□□□□□ -1.79
GTF3C3-207ENST00000451088 CACNA1CQ13936 2221 aa3.86□□□□□ -1.79
GTF3C3-207ENST00000451088 DCHS2Q6V1P9 2916 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 TLN2Q9Y4G6 2542 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 IGHV1OR21-1A0A087WYE8 117 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 C1orf232A0A0U1RR37 186 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 ZCWPW2A0A1B0GU75 182 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 NPIPB15A6NHN6 443 aaPredicted RBP3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 A8MX80 341 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 ZNF487B1APH4 448 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 ZNF189O75820 626 aaPredicted RBP3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 FGF1P05230 155 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 H2AFZP0C0S5 128 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 CD99P14209 185 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 LIFP15018 202 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 ITIH1P19827 911 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 LHCGRP22888 699 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 ETV5P41161 510 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 PAFAH1B1P43034 410 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 RANBP1P43487 201 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 RGRP47804 291 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 LEPRP48357 1165 aaKnown RBP3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 STC1P52823 247 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 UBASH3AP57075 661 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 OR1D5P58170 312 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 RPL24P83731 157 aaKnown RBP3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 SLC25A11Q02978 314 aaKnown RBP3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 RUNX1T1Q06455 604 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 PAFAH1B3Q15102 231 aaKnown RBP3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 PDK1Q15118 436 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 CA9Q16790 459 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 DEFB109BQ30KR1 87 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 TMEM35AQ53FP2 167 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 ZDHHC20Q5W0Z9 365 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 LRRC66Q68CR7 880 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 SLC35E4Q6ICL7 350 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 ALKBH5Q6P6C2 394 aaKnown RBP3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 KLHL35Q6PF15 583 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 DOK6Q6PKX4 331 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 CEACAM20Q6UY09 585 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 ZNF704Q6ZNC4 412 aaPredicted RBP3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 H2AFVQ71UI9 128 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 HSD11B1LQ7Z5J1 315 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 VSIG1Q86XK7 387 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 SFRP1Q8N474 314 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 CCNYQ8ND76 341 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 TRIM58Q8NG06 486 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 HMGCLL1Q8TB92 370 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 LRRC45Q96CN5 670 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 SPDL1Q96EA4 605 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 TSGA13Q96PP4 275 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 LYSMD1Q96S90 227 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 LITAFQ99732 161 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 FERMT1Q9BQL6 677 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 MLPHQ9BV36 600 aaPredicted RBP3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 GFRA4Q9GZZ7 299 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 UCK1Q9HA47 277 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 RDH14Q9HBH5 336 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 MRPL40Q9NQ50 206 aaKnown RBP3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 RBM22Q9NW64 420 aaKnown RBP eCLIP3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 SLC39A1Q9NY26 324 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 PDP2Q9P2J9 529 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 CIDEBQ9UHD4 219 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 HAO1Q9UJM8 370 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 TMCO1Q9UM00 188 aa3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 FAF1Q9UNN5 650 aaPredicted RBP3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 MN1Q10571 1320 aaPredicted RBP3.85□□□□□ -1.79
GTF3C3-207ENST00000451088 SONP18583 2426 aaKnown RBP3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 AKAP9Q99996 3911 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 CHD5Q8TDI0 1954 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 PIKFYVEQ9Y2I7 2098 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 IGLV5-45A0A087WSX0 123 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 IGHV5-10-1A0A0J9YXX1 117 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 ANKRD66B4E2M5 251 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 MKRN2OSH3BPM6 223 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 MAP2K7O14733 419 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 POLR1CO15160 346 aaPredicted RBP3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 KMOO15229 486 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 INPP4BO15327 924 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 TOX3O15405 576 aaPredicted RBP3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 B4GAT1O43505 415 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 SYNGR3O43761 229 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 VEGFDO43915 354 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 MFSD11O43934 449 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 ATP6V1G1O75348 118 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 PROSCO94903 275 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 SLC25A14O95258 325 aaPredicted RBP3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 PRKAR1AP10644 381 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 THRAP10827 490 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 F3P13726 295 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 POLR2CP19387 275 aaPredicted RBP3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 AK4P27144 223 aaPredicted RBP3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 ABCD3P28288 659 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 CD1CP29017 333 aa3.84□□□□□ -1.79
GTF3C3-207ENST00000451088 APOBEC1P41238 236 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms