RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 CDC40O60508 579 aaKnown RBP eCLIP16.97■□□□□ 0.31
CHTOP-202ENST00000368687 TSPAN2O60636 221 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 UGT2B11O75310 529 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 SEMA7AO75326 666 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 KITP10721 976 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 IDO1P14902 403 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 PTGS2P35354 604 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 KIR3DL1P43629 444 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 DIO3P55073 304 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 LRRC74AQ0VAA2 488 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 NPSR1Q6W5P4 371 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 SZRD1Q7Z422 152 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 KRTCAP2Q8N6L1 136 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 OR52N2Q8NGI0 321 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 ACTRT2Q8TDY3 377 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 MAELQ96JY0 434 aaKnown RBP16.97■□□□□ 0.31
CHTOP-202ENST00000368687 PROK2Q9HC23 129 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 ACKR4Q9NPB9 350 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 ZCCHC3Q9NUD5 404 aaKnown RBP16.97■□□□□ 0.31
CHTOP-202ENST00000368687 GIN1Q9NXP7 522 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 ERRFI1Q9UJM3 462 aaPredicted RBP16.97■□□□□ 0.31
CHTOP-202ENST00000368687 PCDHGB4Q9UN71 923 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 ABCG2Q9UNQ0 655 aa16.97■□□□□ 0.31
CHTOP-202ENST00000368687 A0A1B0GVC2 190 aa16.96■□□□□ 0.31
CHTOP-202ENST00000368687 LRRC3CA6NJW4 275 aa16.96■□□□□ 0.31
CHTOP-202ENST00000368687 RNF224P0DH78 156 aa16.96■□□□□ 0.31
CHTOP-202ENST00000368687 LCN1P31025 176 aa16.96■□□□□ 0.31
CHTOP-202ENST00000368687 MAGEA5P43359 124 aa16.96■□□□□ 0.31
CHTOP-202ENST00000368687 CDK9P50750 372 aaKnown RBP16.96■□□□□ 0.31
CHTOP-202ENST00000368687 PGS1Q32NB8 556 aa16.96■□□□□ 0.31
CHTOP-202ENST00000368687 GLB1L3Q8NCI6 653 aaPredicted RBP16.96■□□□□ 0.31
CHTOP-202ENST00000368687 FAM120BQ96EK7 910 aaKnown RBP16.96■□□□□ 0.31
CHTOP-202ENST00000368687 JSRP1Q96MG2 331 aaPredicted RBP16.96■□□□□ 0.31
CHTOP-202ENST00000368687 PSMG3-AS1Q96PY0 264 aa16.96■□□□□ 0.31
CHTOP-202ENST00000368687 ADOQ96SZ5 270 aa16.96■□□□□ 0.31
CHTOP-202ENST00000368687 ZBTB18Q99592 522 aa16.96■□□□□ 0.31
CHTOP-202ENST00000368687 EQTNQ9NQ60 294 aa16.96■□□□□ 0.31
CHTOP-202ENST00000368687 AIG1Q9NVV5 245 aa16.96■□□□□ 0.31
CHTOP-202ENST00000368687 PCDHGB3Q9Y5G1 929 aa16.96■□□□□ 0.31
CHTOP-202ENST00000368687 SNX8Q9Y5X2 465 aa16.96■□□□□ 0.31
CHTOP-202ENST00000368687 NUP214P35658 2090 aaPredicted RBP16.95■□□□□ 0.3
CHTOP-202ENST00000368687 A0A1B0GTH9 108 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 WIPF3A6NGB9 483 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 E9PBE3 544 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 AQP7O14520 342 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 BCKDKO14874 412 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 CFLARO15519 480 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 NKX2-2O95096 273 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 IL33O95760 270 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 LDLRP01130 860 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 GDF1P27539 372 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 EPHA3P29320 983 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 GABRA3P34903 492 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 CCT3P49368 545 aaKnown RBP16.95■□□□□ 0.3
CHTOP-202ENST00000368687 CLK3P49761 638 aaKnown RBP16.95■□□□□ 0.3
CHTOP-202ENST00000368687 PRKAG1P54619 331 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 GSTA3Q16772 222 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 SPDYE7PQ495Y7 208 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 C1QL3Q5VWW1 255 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 TIGD3Q6B0B8 471 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 MFSD12Q6NUT3 480 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 MYO7BQ6PIF6 2116 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 RPTNQ6XPR3 784 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 ACAD11Q709F0 780 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 TRILQ7L0X0 811 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 OR1J4Q8NGS1 313 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 FAM57AQ8TBR7 257 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 GPR151Q8TDV0 419 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 SARAFQ96BY9 339 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 NTNG2Q96CW9 530 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 STACQ99469 402 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 DEFB127Q9H1M4 99 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 LDAHQ9H6V9 325 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 SDHAF3Q9NRP4 125 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 DUSP22Q9NRW4 184 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 SIRT3Q9NTG7 399 aaPredicted RBP16.95■□□□□ 0.3
CHTOP-202ENST00000368687 FAM120CQ9NX05 1096 aaKnown RBP16.95■□□□□ 0.3
CHTOP-202ENST00000368687 C15orf41Q9Y2V0 281 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 MAST4O15021 2626 aa16.95■□□□□ 0.3
CHTOP-202ENST00000368687 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 PRSS51A0A1B0GVH4 220 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 SNPHO15079 494 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 ICOSLGO75144 302 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 SASH3O75995 380 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 ALOX5P09917 674 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 ESRRAP11474 423 aaPredicted RBP16.94■□□□□ 0.3
CHTOP-202ENST00000368687 EVI2BP34910 448 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 GCKP35557 465 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 MAP3K8P41279 467 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 MAN2A2P49641 1150 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 IRX1P78414 480 aaPredicted RBP16.94■□□□□ 0.3
CHTOP-202ENST00000368687 GAB1Q13480 694 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 HSP90B2PQ58FF3 399 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 NXNQ6DKJ4 435 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 FJX1Q86VR8 437 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 RNF138Q8WVD3 245 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 SLC9A6Q92581 669 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 GIMAP5Q96F15 307 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 MAGEB18Q96M61 343 aa16.94■□□□□ 0.3
CHTOP-202ENST00000368687 NODALQ96S42 347 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms