RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 CDKL4Q5MAI5 379 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 C22orf42Q6IC83 251 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 FRMPD2BQ6IN97 320 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 LRRC70Q7Z2Q7 622 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 AMZ2Q86W34 360 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 REPS1Q96D71 796 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 SLC12A9Q9BXP2 914 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 MRPL15Q9P015 296 aaKnown RBP8.59□□□□□ -1.03
TOP1-201ENST00000361337 NDOR1Q9UHB4 597 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 RAB23Q9ULC3 237 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 MGAT4DA6NG13 374 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 FAM170BA6NMN3 283 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 ZAR1LA6NP61 321 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 M0R233 179 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 GATBO75879 557 aaKnown RBP8.59□□□□□ -1.03
TOP1-201ENST00000361337 DRD5P21918 477 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 LIMS1P48059 325 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 CSNK1DP48730 415 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 RORCP51449 518 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 LIM2P55344 173 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 VSX2P58304 361 aaPredicted RBP8.59□□□□□ -1.03
TOP1-201ENST00000361337 CDC42P60953 191 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 TSPAN5P62079 268 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 RPS26P62854 115 aaKnown RBP8.59□□□□□ -1.03
TOP1-201ENST00000361337 SPHARQ15513 63 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 ZNF776Q68DI1 518 aaPredicted RBP8.59□□□□□ -1.03
TOP1-201ENST00000361337 ELP2Q6IA86 826 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 KIAA1211LQ6NV74 962 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 ARMC6Q6NXE6 501 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 USP30Q70CQ3 517 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 VOPP1Q96AW1 172 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 ARRDC3Q96B67 414 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 RADILQ96JH8 1075 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 FCRL1Q96LA6 429 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 OR4K3Q96R72 315 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 GAL3ST1Q99999 423 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 PTGFRNQ9P2B2 879 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 PLEKHB1Q9UF11 243 aaPredicted RBP8.59□□□□□ -1.03
TOP1-201ENST00000361337 CMAHPQ9Y471 501 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 PTPRSQ13332 1948 aa8.59□□□□□ -1.03
TOP1-201ENST00000361337 FXYD6-FXYD2A0A087WZ82 144 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 B4DGG1 531 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 C5orf58C9J3I9 102 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 ZNF780AO75290 641 aaPredicted RBP8.58□□□□□ -1.04
TOP1-201ENST00000361337 GADD45GO95257 159 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 TGFB1P01137 390 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 RLN1P04808 185 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 APEX1P27695 318 aaKnown RBP8.58□□□□□ -1.04
TOP1-201ENST00000361337 XCR1P46094 333 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 DHPSP49366 369 aaPredicted RBP8.58□□□□□ -1.04
TOP1-201ENST00000361337 CRISP1P54107 249 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 PTSQ03393 145 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 PUM1Q14671 1186 aaKnown RBP eCLIP8.58□□□□□ -1.046e-9■■□□□ 11.4
TOP1-201ENST00000361337 ATXN7L3Q14CW9 347 aaPredicted RBP8.58□□□□□ -1.04
TOP1-201ENST00000361337 CDONQ4KMG0 1287 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 LIPIQ6XZB0 460 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 MSANTD1Q6ZTZ1 278 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 MEX3DQ86XN8 651 aaKnown RBP8.58□□□□□ -1.04
TOP1-201ENST00000361337 RBM45Q8IUH3 476 aaKnown RBP8.58□□□□□ -1.04
TOP1-201ENST00000361337 MEIOBQ8N635 442 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 SETD6Q8TBK2 473 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 C2CD4CQ8TF44 421 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 GLYATL1Q969I3 302 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 MACROD1Q9BQ69 325 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 SLC35A5Q9BS91 424 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 FXYD6Q9H0Q3 95 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 GALNT9Q9HCQ5 603 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 OR51B4Q9Y5P0 310 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 SPIN1Q9Y657 262 aaPredicted RBP8.58□□□□□ -1.04
TOP1-201ENST00000361337 TRPM6Q9BX84 2022 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 C2CD4DB7Z1M9 353 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 TXNL1O43396 289 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 ERAL1O75616 437 aaKnown RBP8.58□□□□□ -1.04
TOP1-201ENST00000361337 RAB3BP20337 219 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 CTHP32929 405 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 SLC5A12Q1EHB4 618 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 HIST2H2AA3Q6FI13 130 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 SSX6Q7RTT6 188 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 RDH10Q8IZV5 341 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 ZFP82Q8N141 532 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 CPXM2Q8N436 756 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 RAB42Q8N4Z0 105 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 TMEM145Q8NBT3 493 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 SRFBP1Q8NEF9 429 aaKnown RBP8.58□□□□□ -1.04
TOP1-201ENST00000361337 ATP6V1C2Q8NEY4 427 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 OR4E2Q8NGC2 313 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 POP5Q969H6 163 aaKnown RBP8.58□□□□□ -1.04
TOP1-201ENST00000361337 SGTBQ96EQ0 304 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 ZNF768Q9H5H4 540 aaKnown RBP8.58□□□□□ -1.04
TOP1-201ENST00000361337 SLC25A19Q9HC21 320 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 ATP13A2Q9NQ11 1180 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 ZMAT5Q9UDW3 170 aaKnown RBP8.58□□□□□ -1.04
TOP1-201ENST00000361337 SLC13A4Q9UKG4 626 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 IRAK3Q9Y616 596 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 ZNF670-ZNF695F2Z2N8 137 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 LGALS8O00214 317 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 CFIP05156 583 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 DNASE1P24855 282 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 ACSL1P33121 698 aa8.58□□□□□ -1.04
TOP1-201ENST00000361337 SDC2P34741 201 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms