RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 SLC44A2Q8IWA5 706 aaPredicted RBP16.14■□□□□ 0.17
HDDC3-201ENST00000330334 CCDC63Q8NA47 563 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 RELL2Q8NC24 303 aaPredicted RBP16.14■□□□□ 0.17
HDDC3-201ENST00000330334 AMDHD1Q96NU7 426 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 SH3GL2Q99962 352 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 GLIPR2Q9H4G4 154 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 C1orf109Q9NX04 203 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 TAS2R10Q9NYW0 307 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 MAPRE3Q9UPY8 281 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 POLR3HQ9Y535 204 aaPredicted RBP16.14■□□□□ 0.17
HDDC3-201ENST00000330334 ARHGAP21Q5T5U3 1957 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 HIVEP1P15822 2718 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 F8P00451 2351 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 TTC36A6NLP5 189 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 KDM4EB2RXH2 506 aaPredicted RBP16.13■□□□□ 0.17
HDDC3-201ENST00000330334 UPK1AO00322 258 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 RGS14O43566 566 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 TRIM13O60858 407 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 SEC22BO75396 215 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 NME6O75414 186 aaPredicted RBP16.13■□□□□ 0.17
HDDC3-201ENST00000330334 JUNP05412 331 aaKnown RBP16.13■□□□□ 0.17
HDDC3-201ENST00000330334 FGF4P08620 206 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 BMP5P22003 454 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 CTSSP25774 331 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 NTSP30990 170 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 OPRM1P35372 400 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 ZNF136P52737 540 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 AAGABQ6PD74 315 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 ADGRE4PQ86SQ3 457 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 C10orf107Q8IVU9 208 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 TRIM42Q8IWZ5 723 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 RIBC1Q8N443 379 aaPredicted RBP16.13■□□□□ 0.17
HDDC3-201ENST00000330334 OR14L1PQ8NHC6 308 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 RNASE6Q93091 150 aaKnown RBP16.13■□□□□ 0.17
HDDC3-201ENST00000330334 ELP4Q96EB1 424 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 FCRL1Q96LA6 429 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 ZFP3Q96NJ6 502 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 TRIB1Q96RU8 372 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 C12orf65Q9H3J6 166 aaKnown RBP16.13■□□□□ 0.17
HDDC3-201ENST00000330334 ABCG2Q9UNQ0 655 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 OR10H1Q9Y4A9 318 aa16.13■□□□□ 0.17
HDDC3-201ENST00000330334 FAM221AA4D161 298 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 SMIM23A6NLE4 172 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 AZIN1O14977 448 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 TBX19O60806 448 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 NUDT17P0C025 328 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 NEFHP12036 1026 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 CYP4B1P13584 511 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 CHMP24386 653 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 GRK2P25098 689 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 MC3RP41968 323 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 KIR2DL3P43628 341 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 PCLAFQ15004 111 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 BCL2A1Q16548 175 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 CLEC6AQ6EIG7 209 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 TMEM107Q6UX40 140 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 SPNS3Q6ZMD2 512 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 Q6ZSR9 355 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 IFNEQ86WN2 208 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 C4orf33Q8N1A6 199 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 OR4N2Q8NGD1 307 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 CDC26Q8NHZ8 85 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 CCT7Q99832 543 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 LMF2Q9BU23 707 aaKnown RBP16.12■□□□□ 0.17
HDDC3-201ENST00000330334 GATA5Q9BWX5 397 aaPredicted RBP16.12■□□□□ 0.17
HDDC3-201ENST00000330334 ANKZF1Q9H8Y5 726 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 LRTM1Q9HBL6 345 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 DDX18Q9NVP1 670 aaKnown RBP16.12■□□□□ 0.17
HDDC3-201ENST00000330334 JKAMPQ9P055 326 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 FBXL2Q9UKC9 423 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 MRTO4Q9UKD2 239 aaKnown RBP16.12■□□□□ 0.17
HDDC3-201ENST00000330334 TMED5Q9Y3A6 229 aa16.12■□□□□ 0.17
HDDC3-201ENST00000330334 FADS1O60427 444 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 ZIC3O60481 467 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 CTAG2O75638 210 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 ZWINTO95229 277 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 CHEK2O96017 543 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 TACR1P25103 407 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 EVI2BP34910 448 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 LHX2P50458 406 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 DSCR4P56555 118 aaPredicted RBP16.11■□□□□ 0.17
HDDC3-201ENST00000330334 WNT3P56703 355 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 EEF1A1P68104 462 aaKnown RBP16.11■□□□□ 0.17
HDDC3-201ENST00000330334 GAB1Q13480 694 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 ZNHIT3Q15649 155 aaPredicted RBP16.11■□□□□ 0.17
HDDC3-201ENST00000330334 DECR1Q16698 335 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 EEF1A1P5Q5VTE0 462 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 FADS6Q8N9I5 356 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 BANPQ8N9N5 519 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 FAM222BQ8WU58 562 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 HOXB13Q92826 284 aaPredicted RBP16.11■□□□□ 0.17
HDDC3-201ENST00000330334 WNT2BQ93097 391 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 EFHD2Q96C19 240 aaPredicted RBP16.11■□□□□ 0.17
HDDC3-201ENST00000330334 EGLN2Q96KS0 407 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 TM9SF2Q99805 663 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 IQCGQ9H095 443 aaKnown RBP16.11■□□□□ 0.17
HDDC3-201ENST00000330334 Q9N2J8 555 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 SDHAF3Q9NRP4 125 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 NTMQ9P121 344 aa16.11■□□□□ 0.17
HDDC3-201ENST00000330334 CBLCQ9ULV8 474 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms