RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 GALP22466 123 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 HIST1H1TP22492 207 aaPredicted RBP8.16□□□□□ -1.1
CLK1-201ENST00000321356 CFL1P23528 166 aaKnown RBP8.16□□□□□ -1.1
CLK1-201ENST00000321356 PTGER1P34995 402 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 BCL6P41182 706 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 CLCNKAP51800 687 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 PRKAG1P54619 331 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 CDH11P55287 796 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 DMPKQ09013 629 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 ST3GAL3Q11203 375 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 MAP4K2Q12851 820 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 FZD5Q13467 585 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 DSG2Q14126 1118 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 ZNF234Q14588 700 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 CEBPEQ15744 281 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 DECR1Q16698 335 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 WSCD2Q2TBF2 565 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 DEFB115Q30KQ5 88 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 Q5BKY6 102 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 ZNF311Q5JNZ3 666 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 EOGTQ5NDL2 527 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 ABHD17CQ6PCB6 329 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 TRILQ7L0X0 811 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 SHFQ7M4L6 423 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 GRASPQ7Z6J2 395 aaPredicted RBP8.16□□□□□ -1.1
CLK1-201ENST00000321356 Q8N402 240 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 TMEM145Q8NBT3 493 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 NLGN4YQ8NFZ3 816 aaPredicted RBP8.16□□□□□ -1.1
CLK1-201ENST00000321356 OR4Q3Q8NH05 313 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 PIGXQ8TBF5 258 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 DNAJA4Q8WW22 397 aaPredicted RBP8.16□□□□□ -1.1
CLK1-201ENST00000321356 RAB7BQ96AH8 199 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 MS4A6EQ96DS6 147 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 CHFRQ96EP1 664 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 C16orf58Q96GQ5 468 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 SENP5Q96HI0 755 aaPredicted RBP8.16□□□□□ -1.1
CLK1-201ENST00000321356 FAM46AQ96IP4 442 aaKnown RBP8.16□□□□□ -1.1
CLK1-201ENST00000321356 OR7D2Q96RA2 312 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 TMEM43Q9BTV4 400 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 TRAF4Q9BUZ4 470 aaPredicted RBP8.16□□□□□ -1.1
CLK1-201ENST00000321356 BTBD1Q9H0C5 482 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 QRSL1Q9H0R6 528 aaKnown RBP8.16□□□□□ -1.1
CLK1-201ENST00000321356 KLHL31Q9H511 634 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 PRDM7Q9NQW5 492 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 ACOXLQ9NUZ1 547 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 COMMD3Q9UBI1 195 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 PRKAG2Q9UGJ0 569 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 ACSL5Q9ULC5 683 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 CLCA2Q9UQC9 943 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 ATG4BQ9Y4P1 393 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 LAMA3Q16787 3333 aa8.16□□□□□ -1.1
CLK1-201ENST00000321356 FAM25AB3EWG3 89 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 FAM25CB3EWG5 89 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 FAM25GB3EWG6 89 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 GPR89AB7ZAQ6 455 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 J3QRE1 110 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 SGK494L7N484 410 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 GABRPO00591 440 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 EMC8O43402 210 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 CHST10O43529 356 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 FRS3O43559 492 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 HPGDSO60760 199 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 ERAL1O75616 437 aaKnown RBP8.15□□□□□ -1.1
CLK1-201ENST00000321356 NTN1O95631 604 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 AIFM1O95831 613 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 SERPIND1P05546 499 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 GPR89BP0CG08 455 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 ALPPL2P10696 532 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 SLC2A2P11168 524 aaPredicted RBP8.15□□□□□ -1.1
CLK1-201ENST00000321356 CCL5P13501 91 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 ACP5P13686 325 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 GNSP15586 552 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 ATP5A1P25705 553 aaKnown RBP8.15□□□□□ -1.1
CLK1-201ENST00000321356 PKLRP30613 574 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 PRKAR1BP31321 381 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 TRHRP34981 398 aaPredicted RBP8.15□□□□□ -1.1
CLK1-201ENST00000321356 TRIM23P36406 574 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 STAT5AP42229 794 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 RAB28P51157 221 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 PRR5P85299 388 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 CHRNEQ04844 493 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 P2RY14Q15391 338 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 ZNF750Q32MQ0 723 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 PIP5KL1Q5T9C9 394 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 TRIQKQ629K1 86 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 TYW3Q6IPR3 259 aaKnown RBP8.15□□□□□ -1.1
CLK1-201ENST00000321356 SLC48A1Q6P1K1 146 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 PLET1Q6UQ28 207 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 TMEM107Q6UX40 140 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 ZNF620Q6ZNG0 422 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 ADCK2Q7Z695 626 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 LHFPL3Q86UP9 236 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 VRK2Q86Y07 508 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 SFTPA1Q8IWL2 248 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 TRIM48Q8IWZ4 208 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 KLHL36Q8N4N3 616 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 RAB42Q8N4Z0 105 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 ZFP41Q8N8Y5 198 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 ACOT4Q8N9L9 421 aa8.15□□□□□ -1.1
CLK1-201ENST00000321356 OR4F15Q8NGB8 312 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms