RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 PTGFRNQ9P2B2 879 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 PROM1O43490 865 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 HMGN2P05204 90 aaKnown RBP16.87■□□□□ 0.29
TRAF4-201ENST00000262395 FGF9P31371 208 aaPredicted RBP16.87■□□□□ 0.29
TRAF4-201ENST00000262395 ENTPD8Q5MY95 495 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 NKAIN4Q8IVV8 208 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 ARIH2OSQ8N7S6 290 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 OR51G2Q8NGK0 314 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 AKAP1Q92667 903 aaKnown RBP eCLIP16.87■□□□□ 0.291e-7■■■■■ 27.2
TRAF4-201ENST00000262395 SLC38A2Q96QD8 506 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 MKRN2Q9H000 416 aaKnown RBP16.87■□□□□ 0.29
TRAF4-201ENST00000262395 NIPAL2Q9H841 368 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 SLC23A2Q9UGH3 650 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 ZNF222Q9UK12 451 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 ABT1Q9ULW3 272 aaKnown RBP16.87■□□□□ 0.29
TRAF4-201ENST00000262395 EXOSC1Q9Y3B2 195 aaKnown RBP16.87■□□□□ 0.29
TRAF4-201ENST00000262395 CDH10Q9Y6N8 788 aa16.87■□□□□ 0.29
TRAF4-201ENST00000262395 A0A0A6YYJ9 748 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 SYNDIG1LA6NDD5 238 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 PIP5K1CO60331 668 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 ACADLP28330 430 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 STXBP1P61764 594 aaKnown RBP16.86■□□□□ 0.29
TRAF4-201ENST00000262395 DUSP2Q05923 314 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 MESP2Q0VG99 397 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 SF3A2Q15428 464 aaKnown RBP16.86■□□□□ 0.29
TRAF4-201ENST00000262395 NDUFAF5Q5TEU4 345 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 TMEM91Q6ZNR0 172 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 UBE3DQ7Z6J8 389 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 CD99L2Q8TCZ2 262 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 DTD2Q96FN9 168 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 PRRC1Q96M27 445 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 BBS4Q96RK4 519 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 SPHK2Q9NRA0 654 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 UCKL1Q9NWZ5 548 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 SIRT4Q9Y6E7 314 aaPredicted RBP16.86■□□□□ 0.29
TRAF4-201ENST00000262395 HLA-DQB1P01920 261 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 INHAP05111 366 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 TRHRP34981 398 aaPredicted RBP16.86■□□□□ 0.29
TRAF4-201ENST00000262395 TEAD2Q15562 447 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 VASNQ6EMK4 673 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 ANKRD54Q6NXT1 300 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 CACUL1Q86Y37 369 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 ZNF485Q8NCK3 441 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 SMAP2Q8WU79 429 aaPredicted RBP16.86■□□□□ 0.29
TRAF4-201ENST00000262395 SMG7Q92540 1137 aaKnown RBP16.86■□□□□ 0.29
TRAF4-201ENST00000262395 TFGQ92734 400 aaPredicted RBP16.86■□□□□ 0.29
TRAF4-201ENST00000262395 OMA1Q96E52 524 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 AMDHD1Q96NU7 426 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 PPIL3Q9H2H8 161 aaKnown RBP16.86■□□□□ 0.29
TRAF4-201ENST00000262395 KIAA0355O15063 1070 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 PGRMC2O15173 223 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 NDUFS4O43181 175 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 LZTS3O60299 673 aaPredicted RBP16.86■□□□□ 0.29
TRAF4-201ENST00000262395 HLA-DPB1P04440 258 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 FUT1P19526 365 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 SSR2P43308 183 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 CD200R1LQ6Q8B3 271 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 TMEM107Q6UX40 140 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 FBXO15Q8NCQ5 510 aaPredicted RBP16.86■□□□□ 0.29
TRAF4-201ENST00000262395 ARSGQ96EG1 525 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 KLHL31Q9H511 634 aa16.86■□□□□ 0.29
TRAF4-201ENST00000262395 EEF1E1O43324 174 aaKnown RBP16.85■□□□□ 0.29
TRAF4-201ENST00000262395 OR10A3P58181 314 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 SP3Q02447 781 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 NDUFA9Q16795 377 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 SLC25A30Q5SVS4 291 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 TIGD3Q6B0B8 471 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 MTFR2Q6P444 385 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 CD300LDQ6UXZ3 194 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 NUDT13Q86X67 352 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 RAD51AP1Q96B01 352 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 ZC3HAV1LQ96H79 300 aaKnown RBP16.85■□□□□ 0.29
TRAF4-201ENST00000262395 KCNJ15Q99712 375 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 AIF1LQ9BQI0 150 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 SNTNA6NMZ2 147 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 SPINT1O43278 529 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 SLC43A1O75387 559 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 HOXB3P14651 431 aaPredicted RBP16.85■□□□□ 0.29
TRAF4-201ENST00000262395 AHRP35869 848 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 C19orf57Q0VDD7 668 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 ZNF311Q5JNZ3 666 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 SMARCD3Q6STE5 483 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 SIRT6Q8N6T7 355 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 SAMD12Q8N8I0 201 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 PLA2G15Q8NCC3 412 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 OR6C4Q8NGE1 309 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 NUS1Q96E22 293 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 ABCG5Q9H222 651 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 XKR8Q9H6D3 395 aa16.85■□□□□ 0.29
TRAF4-201ENST00000262395 ZNF624Q9P2J8 865 aaPredicted RBP16.85■□□□□ 0.29
TRAF4-201ENST00000262395 HEATR5BQ9P2D3 2071 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 EIF4EP06730 217 aaKnown RBP16.84■□□□□ 0.29
TRAF4-201ENST00000262395 TBXA2RP21731 343 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 SHC1P29353 583 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 MAPK9P45984 424 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 CLDN2P57739 230 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 ADAM15Q13444 863 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 TJAP1Q5JTD0 557 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 MZT2AQ6P582 158 aa16.84■□□□□ 0.29
TRAF4-201ENST00000262395 TRILQ7L0X0 811 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms