RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Mmgt2Q8R3L0 123 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr1090Q8VGA6 313 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfr561Q8VGZ6 314 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 PigkQ9CXY9 395 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Fiz1Q9WTJ4 500 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Vmn1r77E9PY60 306 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Cyp4a10O88833 509 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Q3V0E1 1183 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Serpinf2Q61247 491 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 CmahQ61419 577 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 GcgrQ61606 485 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Olfml2aQ8BHP7 681 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Q8C3W1 322 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Zmynd11Q8R5C8 602 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Lims2Q91XD2 341 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Enpp2Q9R1E6 862 aa14.77□□□□□ -0.04
Ccdc88b-201ENSMUST00000113440 Zfp738B8JJX8 793 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm10608E9PZ13 166 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm21833J3QPK1 500 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 AldocP05063 363 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Ly6dP35459 127 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 UqcrhP99028 89 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm732Q3V0P9 516 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Guk1Q64520 198 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Tas2r3Q7TQA7 316 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Cdh7Q8BM92 785 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Dock2Q8C3J5 1828 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 EndovQ8C9A2 338 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Q8CF31 99 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gatad2aQ8CHY6 629 aaKnown RBP14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Paip1Q8VE62 400 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr811Q8VFI1 319 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Slc2a10Q8VHD6 536 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 D10Jhu81eQ9D172 266 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Hacl1Q9QXE0 581 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Slc7a5Q9Z127 512 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Zfp992B1ASD8 573 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Slc28a2O88627 660 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Rplp0P14869 317 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Il1r2P27931 410 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Ms4a15Q3UPL6 245 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Thoc6Q5U4D9 341 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Slc35f1Q8BGK5 408 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Plekha1Q8BUL6 383 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Angptl8Q8R1L8 198 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Zfp991Q8R1N3 573 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr1250Q8VGM3 314 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 EdaraddQ8VHX2 208 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gpr146Q99LE2 333 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Mrpl49Q9CQ40 166 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 4933436I01RikQ9D3T1 429 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Cers5Q9D6K9 414 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 EurlQ9D7G4 290 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Copz2Q9JHH9 205 aa14.77□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr520E9Q518 316 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Nme6O88425 189 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Matn4O89029 624 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Sap25Q1EHW4 186 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Zfp791Q497V9 528 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 P4ha3Q6W3F0 542 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Slc6a17Q8BJI1 727 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Neto1Q8R4I7 533 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Pafah2Q8VDG7 390 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Vmn1r52Q9EP79 309 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Cbll1Q9JIY2 491 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Cldn8Q9Z260 225 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Megf6Q80V70 1572 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm16432A0A0A6YXX9 775 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Cyp2j5O54749 501 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Tlx3O55144 291 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Ido1P28776 407 aaKnown RBP14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Tial1P70318 392 aaKnown RBP14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 UradQ283N4 178 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Kmt5cQ6Q783 468 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 C8bQ8BH35 589 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Phf21bQ8C966 487 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Acy3Q91XE4 318 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Msantd3Q9CR78 275 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Senp8Q9D2Z4 221 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm42372A0A1B0GT27 204 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Tbc1d25A1A5B6 742 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm11397F6V5V4 377 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Arl9F7BE40 171 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 P04214 136 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Dusp5Q1HL35 384 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Elmod1Q3V1U8 326 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 AktipQ64362 292 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Tmem151aQ6GQT5 468 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Tas2r117Q7M715 330 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Ptges2Q8BWM0 384 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Rdh1Q8CGV4 317 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 CipcQ8R0W1 432 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr109Q8VG96 314 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr347Q8VGK2 312 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Dusp12Q9D0T2 339 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 H60cB1B213 197 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Zfp282E9PVC2 666 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 H2-D1P14427 368 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Drd4P51436 387 aa14.76□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Tspan5P62080 268 aa14.76□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms