RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 CCDC151A5D8V7 595 aa16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 MSTNO14793 375 aa16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 PDYNP01213 254 aa16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 AGFG1P52594 562 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 LTBQ06643 244 aa16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 CSTF3Q12996 717 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 FGFBP1Q14512 234 aa16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 HEPACAMQ14CZ8 416 aa16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 EXOSC7Q15024 291 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 ERCC6LQ2NKX8 1250 aa16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 TRMT12Q53H54 448 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 C8orf74Q6P047 294 aa16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 ADCY4Q8NFM4 1077 aa16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 ZNF483Q8TF39 744 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 CNRIP1Q96F85 164 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 PIP5K1AQ99755 562 aa16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 GIMAP4Q9NUV9 329 aa16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 CLCF1Q9UBD9 225 aa16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 UTS2RQ9UKP6 389 aa16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 PACSIN3Q9UKS6 424 aa16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 MAPRE3Q9UPY8 281 aa16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 WIF1Q9Y5W5 379 aa16.18■□□□□ 0.18
SHKBP1-227ENST00000602011 ULK1O75385 1050 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 SLITRK5O94991 958 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 ESRRBO95718 433 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 PEPDP12955 493 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 TAC1P20366 129 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 MPIP34949 423 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 SLCO1A2P46721 670 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 ALDH9A1P49189 494 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 LHX2P50458 406 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 OCRLQ01968 901 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 RASA2Q15283 850 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 GRAMD2AQ8IUY3 354 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 LRRC75A-AS1Q8N1F1 130 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 PIGTQ969N2 578 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 TMBIM1Q969X1 311 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 INTS12Q96CB8 462 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 SFXN2Q96NB2 322 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 NSUN5Q96P11 429 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 HHATLQ9HCP6 504 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 GALNT9Q9HCQ5 603 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 SDHAF3Q9NRP4 125 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 GALNT8Q9NY28 637 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 ZNF226Q9NYT6 803 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 TAS2R9Q9NYW1 312 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 NINJ2Q9NZG7 142 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 EHD3Q9NZN3 535 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 KIAA1549Q9HCM3 1950 aa16.17■□□□□ 0.18
SHKBP1-227ENST00000602011 PLOD2O00469 737 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 HCRTR2O43614 444 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 PLOD3O60568 738 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 TSPAN2O60636 221 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 ZNF708P17019 499 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 CD53P19397 219 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 IL12BP29460 328 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 HSD17B3P37058 310 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 DSCR4P56555 118 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 SRYQ05066 204 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 FOXF2Q12947 444 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 NNATQ16517 81 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 SPIN4Q56A73 249 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 ZNF628Q5EBL2 1059 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 LETMD1Q6P1Q0 360 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 LUZP2Q86TE4 346 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 CCDC116Q8IYX3 515 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 C1orf52Q8N6N3 182 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 RNF138Q8WVD3 245 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 ADOQ96SZ5 270 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 SLC39A3Q9BRY0 314 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 PFDN4Q9NQP4 134 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 FARSBQ9NSD9 589 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 ELOVL5Q9NYP7 299 aa16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 WBP11Q9Y2W2 641 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-227ENST00000602011 C2orf72A6NCS6 295 aa16.15■□□□□ 0.18
SHKBP1-227ENST00000602011 CT45A8P0DMV1 189 aa16.15■□□□□ 0.18
SHKBP1-227ENST00000602011 CT45A9P0DMV2 189 aa16.15■□□□□ 0.18
SHKBP1-227ENST00000602011 PCSK2P16519 638 aa16.15■□□□□ 0.18
SHKBP1-227ENST00000602011 SOX18P35713 384 aa16.15■□□□□ 0.18
SHKBP1-227ENST00000602011 NKX6-1P78426 367 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-227ENST00000602011 CLCQ05315 142 aa16.15■□□□□ 0.18
SHKBP1-227ENST00000602011 GANABQ14697 944 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-227ENST00000602011 CT45A2Q5DJT8 189 aa16.15■□□□□ 0.18
SHKBP1-227ENST00000602011 LARP4Q71RC2 724 aaKnown RBP eCLIP16.15■□□□□ 0.18
SHKBP1-227ENST00000602011 P4HA3Q7Z4N8 544 aa16.15■□□□□ 0.18
SHKBP1-227ENST00000602011 VSTM2LQ96N03 204 aa16.15■□□□□ 0.18
SHKBP1-227ENST00000602011 PAFAH2Q99487 392 aa16.15■□□□□ 0.18
SHKBP1-227ENST00000602011 DKKL1Q9UK85 242 aa16.15■□□□□ 0.18
SHKBP1-227ENST00000602011 MRTO4Q9UKD2 239 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-227ENST00000602011 DOCK7Q96N67 2140 aa16.15■□□□□ 0.18
SHKBP1-227ENST00000602011 ESYT3A0FGR9 886 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 ZIC3O60481 467 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 SNRPAP09012 282 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 INHBBP09529 407 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 FPR1P21462 350 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 DPP4P27487 766 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 ADSLP30566 484 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 MC3RP41968 323 aa16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 CLK3P49761 638 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-227ENST00000602011 CDH13P55290 713 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms