RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 IVLP07476 585 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 CTSEP14091 401 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 LHCGRP22888 699 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 NR2C2P49116 596 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 PNLIPRP2P54317 469 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 ERVPABLB-1P60509 514 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 SRP54P61011 504 aaKnown RBP3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 MAXP61244 160 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 GBE1Q04446 702 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 PPIDQ08752 370 aaKnown RBP3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 CHAF1BQ13112 559 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 PEX6Q13608 980 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 KRT33BQ14525 404 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 IHHQ14623 411 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 MESDQ14696 234 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 NR1D2Q14995 579 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 CDKN3Q16667 212 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 CLPPQ16740 277 aaPredicted RBP3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 ISXQ2M1V0 245 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 DEFB133Q30KQ1 61 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 ZNF542PQ5EBM4 170 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 TECRLQ5HYJ1 363 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 LRRC73Q5JTD7 316 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 WDR38Q5JTN6 314 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 ALS2CLQ60I27 953 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 SLC35E4Q6ICL7 350 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 ZNF449Q6P9G9 518 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 ENPP7Q6UWV6 458 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 BZW1Q7L1Q6 419 aaKnown RBP3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 GKN2Q86XP6 184 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 KLHDC8BQ8IXV7 354 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 ARL10Q8N8L6 244 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 POC5Q8NA72 575 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 DTX3LQ8TDB6 740 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 LMX1AQ8TE12 382 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 ZNF473Q8WTR7 871 aaKnown RBP3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 UBE2Q2Q8WVN8 375 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 RAPGEF5Q92565 580 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 TSACCQ96A04 125 aaPredicted RBP3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 TADA1Q96BN2 335 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 ZNF524Q96C55 264 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 NUS1Q96E22 293 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 FBXO17Q96EF6 278 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 DTD2Q96FN9 168 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 COX14Q96I36 57 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 ZNF578Q96N58 590 aaPredicted RBP3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 ZNF830Q96NB3 372 aaPredicted RBP3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 OLFM3Q96PB7 478 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 PANX2Q96RD6 677 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 TRIB3Q96RU7 358 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 ANP32EQ9BTT0 268 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 WRAP53Q9BUR4 548 aaKnown RBP3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 TDRD1Q9BXT4 1180 aaKnown RBP3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 RTN4RQ9BZR6 473 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 TCEAL2Q9H3H9 227 aaPredicted RBP3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 SLA2Q9H6Q3 261 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 FGF22Q9HCT0 170 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 NT5MQ9NPB1 228 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 PHPT1Q9NRX4 125 aaPredicted RBP3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 RBM22Q9NW64 420 aaKnown RBP eCLIP3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 PTTG2Q9NZH5 202 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 MDFICQ9P1T7 246 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 APPL1Q9UKG1 709 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 GPR34Q9UPC5 381 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 SLC17A4Q9Y2C5 497 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 OR1A2Q9Y585 309 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 ALG6Q9Y672 507 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 MAST4O15021 2626 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 MGAQ8IWI9 3026 aa3.3□□□□□ -1.88
CKS1BP3-201ENST00000600888 SNRNP200O75643 2136 aaKnown RBP3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 ANKRD12Q6UB98 2062 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 HELZ2Q9BYK8 2649 aaKnown RBP3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 LOC285095A0A1B0GVY8 99 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 hCG_1807616A0A1W2PRN6 198 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 LRRD1A4D1F6 860 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 FAM149AA5PLN7 773 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 PMS2P5A8MQ11 134 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 HACD1B0YJ81 288 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 GPR89AB7ZAQ6 455 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 TMX2-CTNND1H3BSU7 103 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 TO15178 435 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 NUDT21O43809 227 aaKnown RBP3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 ZNF189O75820 626 aaPredicted RBP3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 SOD1P00441 154 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 PCCBP05166 539 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 HLA-DQB2P05538 268 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 GPR89BP0CG08 455 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 CFC1BP0CG36 223 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 CFC1P0CG37 223 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 FGF5P12034 268 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 PORP16435 677 aaPredicted RBP3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 CBLP22681 906 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 ACTN2P35609 894 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 CYLC1P35663 651 aaPredicted RBP3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 CDKN2BP42772 138 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 SSR1P43307 286 aaKnown RBP3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 MAGEA1P43355 309 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 GLIPR1P48060 266 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 SPINT3P49223 89 aa3.29□□□□□ -1.88
CKS1BP3-201ENST00000600888 STC1P52823 247 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms