RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CFAP54Q96N23 3096 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 DMXL1Q9Y485 3027 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 IDSB3KWA1 339 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 SERPINB7O75635 380 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 ZIC2O95409 532 aaPredicted RBP19.34■□□□□ 0.69
PNKP-203ENST00000593946 CDK4P11802 303 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 FOXL2P58012 376 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 PSG6Q00889 435 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 GRAMD1BQ3KR37 738 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 IQCCQ4KMZ1 466 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 IFI44LQ53G44 452 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 DCAF12Q5T6F0 453 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 PIWIL3Q7Z3Z3 882 aaKnown RBP19.34■□□□□ 0.69
PNKP-203ENST00000593946 CATSPER1Q8NEC5 780 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 C16orf52Q8NHV5 167 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 RASSF5Q8WWW0 418 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 DEPDC7Q96QD5 511 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 SPSB2Q99619 263 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 BDH2Q9BUT1 245 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 SOX17Q9H6I2 414 aaPredicted RBP19.34■□□□□ 0.69
PNKP-203ENST00000593946 NTN4Q9HB63 628 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 DNAJB9Q9UBS3 223 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 DTX4Q9Y2E6 619 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 PADI2Q9Y2J8 665 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 CLCA3PQ9Y6N3 262 aa19.34■□□□□ 0.69
PNKP-203ENST00000593946 A8MUA0 341 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 DYRK3O43781 588 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 DKK1O94907 266 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 DDAH2O95865 285 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 CST1P01037 141 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 IGKV3-11P04433 115 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 FABP3P05413 133 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 KLK3P07288 261 aaPredicted RBP19.33■□□□□ 0.68
PNKP-203ENST00000593946 CHRNEQ04844 493 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 ZNF517Q6ZMY9 492 aaPredicted RBP19.33■□□□□ 0.68
PNKP-203ENST00000593946 LANCL3Q6ZV70 420 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 SLCO6A1Q86UG4 719 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 COX18Q8N8Q8 333 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 ICA1LQ8NDH6 482 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 DEFB124Q8NES8 71 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 OR14A16Q8NHC5 309 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 GPR151Q8TDV0 419 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 EME1Q96AY2 570 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 SDF2Q99470 211 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 ZPBPQ9BS86 351 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 WDR54Q9H977 334 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 SEC14L3Q9UDX4 400 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 ABCG2Q9UNQ0 655 aa19.33■□□□□ 0.68
PNKP-203ENST00000593946 PROB1E7EW31 1015 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 AK1P00568 194 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 HEXBP07686 556 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 GABRA3P34903 492 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 KCNJ5P48544 419 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 SLC37A1P57057 533 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 HPCAP84074 193 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 ZNHIT3Q15649 155 aaPredicted RBP19.32■□□□□ 0.68
PNKP-203ENST00000593946 DCST2Q5T1A1 773 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 HES3Q5TGS1 186 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 FRRS1Q6ZNA5 592 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 EPHX4Q8IUS5 362 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 GPR32P1Q8NGA4 272 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 SLC2A12Q8TD20 617 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 APOBEC4Q8WW27 367 aaKnown RBP19.32■□□□□ 0.68
PNKP-203ENST00000593946 GEMIN6Q8WXD5 167 aaKnown RBP19.32■□□□□ 0.68
PNKP-203ENST00000593946 PIK3R3Q92569 461 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 DAZLQ92904 295 aaKnown RBP19.32■□□□□ 0.68
PNKP-203ENST00000593946 TAAR9Q96RI9 348 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 CIB1Q99828 191 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 SPATA5L1Q9BVQ7 753 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 DDA1Q9BW61 102 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 ZNF350Q9GZX5 532 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 BAG5Q9UL15 447 aa19.32■□□□□ 0.68
PNKP-203ENST00000593946 PMS2P1A4D2B8 440 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 PRAMEF25A6NGN4 478 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 hCG_2039718K7EN88 272 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 FCMRO60667 390 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 CYC1P08574 325 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 LIMK1P53667 647 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 EIF3IQ13347 325 aaKnown RBP19.31■□□□□ 0.68
PNKP-203ENST00000593946 FAM198BQ6UWH4 519 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 IZUMO2Q6UXV1 221 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 SPPL2AQ8TCT8 520 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 ZNF721Q8TF20 911 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 VPS50Q96JG6 964 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 PRODH2Q9UF12 536 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 PISDQ9UG56 409 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 OAZ3Q9UMX2 235 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 DTNAQ9Y4J8 743 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 SDK2Q58EX2 2172 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 GVINP1Q7Z2Y8 2422 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 CCDC187A0A096LP49 1063 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.31■□□□□ 0.68
PNKP-203ENST00000593946 A0A1W2PNU3 283 aaPredicted RBP19.31■□□□□ 0.68
PNKP-203ENST00000593946 GXYLT2A0PJZ3 443 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 TTC36A6NLP5 189 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 ALOX12BO75342 701 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 FESP07332 822 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 JMJD7P0C870 316 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 TNFRSF1BP20333 461 aa19.31■□□□□ 0.68
PNKP-203ENST00000593946 POU6F2P78424 691 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms