RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 IFNL1Q8IU54 200 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 SLC44A3Q8N4M1 653 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 RASGEF1AQ8N9B8 481 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 NUP43Q8NFH3 380 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 OR5AR1Q8NGP9 310 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 OR8K3Q8NH51 312 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 TSEN15Q8WW01 171 aaKnown RBP9.95□□□□□ -0.82
USB1-212ENST00000566082 C7orf34Q96L11 122 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 HHATLQ9HCP6 504 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 MYNNQ9NPC7 610 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 ZDHHC4Q9NPG8 344 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 PHPT1Q9NRX4 125 aaPredicted RBP9.95□□□□□ -0.82
USB1-212ENST00000566082 QSER1Q2KHR3 1735 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 TMEM189-UBE2V1I3L0A0 370 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 SCO1O75880 301 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 WISP3O95389 354 aaPredicted RBP9.95□□□□□ -0.82
USB1-212ENST00000566082 HIST1H2ABP04908 130 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 HMGN2P05204 90 aaKnown RBP9.95□□□□□ -0.82
USB1-212ENST00000566082 C1SP09871 688 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 ACP2P11117 423 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 RAB3BP20337 219 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 ZFP36L2P47974 494 aaKnown RBP9.95□□□□□ -0.82
USB1-212ENST00000566082 MRPL19P49406 292 aaKnown RBP9.95□□□□□ -0.82
USB1-212ENST00000566082 ATXN7L3Q14CW9 347 aaPredicted RBP9.95□□□□□ -0.82
USB1-212ENST00000566082 ESCO2Q56NI9 601 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 HIST3H2AQ7L7L0 130 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 LRRTM4Q86VH4 590 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 GID4Q8IVV7 300 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 MMP21Q8N119 569 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 FIBINQ8TAL6 211 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 HIST1H2ACQ93077 130 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 NXPE2Q96DL1 559 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 ZNF582Q96NG8 517 aaPredicted RBP9.95□□□□□ -0.82
USB1-212ENST00000566082 TMEM175Q9BSA9 504 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 DPH7Q9BTV6 452 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 PIGUQ9H490 435 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 RC3H2Q9HBD1 1191 aaKnown RBP9.95□□□□□ -0.82
USB1-212ENST00000566082 FBXL12Q9NXK8 326 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 OR6C2Q9NZP2 312 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 KLHL42Q9P2K6 505 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 MLXQ9UH92 298 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 MED31Q9Y3C7 131 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 AP1M2Q9Y6Q5 423 aa9.95□□□□□ -0.82
USB1-212ENST00000566082 ZAR1LA6NP61 321 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 PLATP00750 562 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 SLC35G6P0C7Q6 338 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 ZNF8P17098 575 aaPredicted RBP9.94□□□□□ -0.82
USB1-212ENST00000566082 DDCP20711 480 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 CMPK1P30085 196 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 MAT2AP31153 395 aaKnown RBP9.94□□□□□ -0.82
USB1-212ENST00000566082 STXBP1P61764 594 aaKnown RBP9.94□□□□□ -0.82
USB1-212ENST00000566082 ZNF805Q5CZA5 627 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 COMMD2Q86X83 199 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 NANOGP1Q8N7R0 232 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 HMGB4Q8WW32 186 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 LCN9Q8WX39 176 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 RERGQ96A58 199 aaPredicted RBP9.94□□□□□ -0.82
USB1-212ENST00000566082 NIPAL2Q9H841 368 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 SLC35C2Q9NQQ7 365 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 MBD2Q9UBB5 411 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 KLHL21Q9UJP4 597 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 SLC27A6Q9Y2P4 619 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 A0A1W2PRQ8 180 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 URADA6NGE7 173 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 ZNF879B4DU55 563 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 PDGFAP04085 211 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 PTPN2P17706 415 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 DDX6P26196 483 aaKnown RBP eCLIP9.94□□□□□ -0.82
USB1-212ENST00000566082 ACADLP28330 430 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 GABRA5P31644 462 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 SLC1A3P43003 542 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 KIR2DL3P43628 341 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 GZMKP49863 264 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 GRIN2CQ14957 1233 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 EIPR1Q53HC9 387 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 PIP5KL1Q5T9C9 394 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 MLIPQ5VWP3 458 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 PYHIN1Q6K0P9 492 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 SLCO4C1Q6ZQN7 724 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 SERPINA12Q8IW75 414 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 KLHDC8BQ8IXV7 354 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 ZNF676Q8N7Q3 588 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 ZFAND1Q8TCF1 268 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 RIT1Q92963 219 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 NKD1Q969G9 470 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 METTL2AQ96IZ6 378 aaKnown RBP9.94□□□□□ -0.82
USB1-212ENST00000566082 GLTPQ9NZD2 209 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 POM121CA8CG34 1229 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 TEX46H3BTG2 121 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 PAHP00439 452 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 MT-ND4P03905 459 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 ALDOBP05062 364 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 TRAPPC2P0DI81 140 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 TRAPPC2BP0DI82 140 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 LAG3P18627 525 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 TAP2Q03519 686 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 PON3Q15166 354 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 LAIR1Q6GTX8 287 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 LAIR2Q6ISS4 152 aa9.94□□□□□ -0.82
USB1-212ENST00000566082 UBE2Q1Q7Z7E8 422 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms