RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ZFP3Q96NJ6 502 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 FAM111AQ96PZ2 611 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 TREX2Q9BQ50 279 aaPredicted RBP15.31■□□□□ 0.04
USB1-211ENST00000565662 FOLH1BQ9HBA9 442 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 SSU72Q9NP77 194 aaKnown RBP15.31■□□□□ 0.04
USB1-211ENST00000565662 C19orf53Q9UNZ5 99 aaPredicted RBP15.31■□□□□ 0.04
USB1-211ENST00000565662 DTX4Q9Y2E6 619 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 POLR3HQ9Y535 204 aaPredicted RBP15.31■□□□□ 0.04
USB1-211ENST00000565662 WIF1Q9Y5W5 379 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 NINQ8N4C6 2090 aa15.31■□□□□ 0.04
USB1-211ENST00000565662 DVL2O14641 736 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 REM1O75628 298 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 HSPA4LO95757 839 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 RFPL3SP0C7P2 107 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 MYZAPP0CAP1 466 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 CT45A8P0DMV1 189 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 CT45A9P0DMV2 189 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 MSX1P28360 303 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 GRNP28799 593 aaKnown RBP15.3■□□□□ 0.04
USB1-211ENST00000565662 PTPN6P29350 595 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 TIMP3P35625 211 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 HPCAL1P37235 193 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 MAD2L1Q13257 205 aaPredicted RBP15.3■□□□□ 0.04
USB1-211ENST00000565662 TOMM20Q15388 145 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 CT45A2Q5DJT8 189 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 ARHGAP21Q5T5U3 1957 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 ANGPTL8Q6UXH0 198 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 ULK2Q8IYT8 1036 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 PRR22Q8IZ63 422 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 OR2L13Q8N349 312 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 OR5M9Q8NGP3 310 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 DOK4Q8TEW6 326 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 NTNG2Q96CW9 530 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 GATA5Q9BWX5 397 aaPredicted RBP15.3■□□□□ 0.04
USB1-211ENST00000565662 ACBD3Q9H3P7 528 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 ACSS1Q9NUB1 689 aaPredicted RBP15.3■□□□□ 0.04
USB1-211ENST00000565662 ATAD3AQ9NVI7 634 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 CENPEQ02224 2701 aa15.3■□□□□ 0.04
USB1-211ENST00000565662 LINC01387J3KSC0 135 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 ICOSLGO75144 302 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 UGT2B11O75310 529 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 LYPLA1O75608 230 aaPredicted RBP15.29■□□□□ 0.04
USB1-211ENST00000565662 KCNH1O95259 989 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 EPPINO95925 133 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 IL2RAP01589 272 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 CELA3AP09093 270 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 LCN1P31025 176 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 SRD5A2P31213 254 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 CRYZQ08257 329 aaKnown RBP15.29■□□□□ 0.04
USB1-211ENST00000565662 KIAA0040Q15053 153 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 NNATQ16517 81 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 VASNQ6EMK4 673 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 ZCCHC12Q6PEW1 402 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 LARP4Q71RC2 724 aaKnown RBP eCLIP15.29■□□□□ 0.04
USB1-211ENST00000565662 PLCZ1Q86YW0 608 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 MARVELD2Q8N4S9 558 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 TWIST2Q8WVJ9 160 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 KAT2AQ92830 837 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 TMBIM1Q969X1 311 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 PPCDCQ96CD2 204 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 AMDHD1Q96NU7 426 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 PRPF18Q99633 342 aaKnown RBP15.29■□□□□ 0.04
USB1-211ENST00000565662 OR2B2Q9GZK3 357 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 SLC6A15Q9H2J7 730 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 REEP4Q9H6H4 257 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 SPRR3Q9UBC9 169 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 ZNF629Q9UEG4 869 aaPredicted RBP15.29■□□□□ 0.04
USB1-211ENST00000565662 KCNN3Q9UGI6 736 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 TRAF6Q9Y4K3 522 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 CCL27Q9Y4X3 112 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 FAM215AQ9Y5M1 114 aa15.29■□□□□ 0.04
USB1-211ENST00000565662 CRYBG3Q68DQ2 2970 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 CD8B2A6NJW9 211 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 LSM1O15116 133 aaKnown RBP15.28■□□□□ 0.04
USB1-211ENST00000565662 TM9SF1O15321 606 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 TSPAN2O60636 221 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 PSMG1O95456 288 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 JUNP05412 331 aaKnown RBP15.28■□□□□ 0.04
USB1-211ENST00000565662 GLI4P10075 376 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 ENDOUP21128 410 aaKnown RBP15.28■□□□□ 0.04
USB1-211ENST00000565662 CHMP24386 653 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 ALDH3A1P30838 453 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 GPC1P35052 558 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 RPL38P63173 70 aaKnown RBP15.28■□□□□ 0.04
USB1-211ENST00000565662 PRR5P85299 388 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 DUSP2Q05923 314 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 SMU1Q2TAY7 513 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 ATP6AP1LQ52LC2 224 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 CLEC6AQ6EIG7 209 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 TMEM64Q6YI46 380 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 MEX3BQ6ZN04 569 aaKnown RBP15.28■□□□□ 0.04
USB1-211ENST00000565662 IFNEQ86WN2 208 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 SLC44A2Q8IWA5 706 aaPredicted RBP15.28■□□□□ 0.04
USB1-211ENST00000565662 DDIASQ8IXT1 998 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 OR7G2Q8NG99 324 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 GOT1L1Q8NHS2 421 aaPredicted RBP15.28■□□□□ 0.04
USB1-211ENST00000565662 PPP1R14CQ8TAE6 165 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 TCP10LQ8TDR4 215 aa15.28■□□□□ 0.04
USB1-211ENST00000565662 ABTB1Q969K4 478 aaPredicted RBP15.28■□□□□ 0.04
USB1-211ENST00000565662 GNRHR2Q96P88 292 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms