RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ZNF367Q7RTV3 350 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 OR2L2Q8NH16 312 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 EBPLQ9BY08 206 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 ZNF226Q9NYT6 803 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 PADI1Q9ULC6 663 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 MMP24Q9Y5R2 645 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 ARL5AQ9Y689 179 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 CLDN24A6NM45 220 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 VEGFDO43915 354 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 ENTPD3O75355 529 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 FAUP35544 74 aaKnown RBP8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 OR1E2P47887 323 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 FABP6P51161 128 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 RIN1Q13671 783 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 CPSF6Q16630 551 aaKnown RBP eCLIP8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 ANKRD34AQ69YU3 496 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 METAP1DQ6UB28 335 aaPredicted RBP8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 ZNF546Q86UE3 836 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 SYT12Q8IV01 421 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 RNF149Q8NC42 400 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 PIGBQ92521 554 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 PYCR2Q96C36 320 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 OR2M2Q96R28 347 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 FNDC11Q9BVV2 318 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 BPIFA1Q9NP55 256 aa8.56□□□□□ -1.04
GTF2A1-203ENST00000553612 NPEPPSL1A6NEC2 478 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 DNASE2O00115 360 aaPredicted RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 SNNO75324 88 aaPredicted RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 C7P10643 843 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 EPORP19235 508 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 POU3F2P20265 443 aaPredicted RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 RPS27AP62979 156 aaKnown RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 UBA52P62987 128 aaKnown RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 ITPK1Q13572 414 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 PGM5Q15124 567 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 TBCEQ15813 527 aaPredicted RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 ZNF311Q5JNZ3 666 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 RNF165Q6ZSG1 346 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 FAM196AQ6ZSG2 479 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 OR2T11Q8NH01 316 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 EDEM1Q92611 657 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 TECTBQ96PL2 329 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 POTEKPQ9BYX7 375 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 RPS6KB2Q9UBS0 482 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 TCRBV3S1A0A5B6 114 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 EEF1E1-BLOC1S5C9J1V9 151 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 AOC2O75106 756 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 NMBRP28336 390 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 PITPNAQ00169 270 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 CST9LP1Q5W188 147 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 Q6ZPB1 254 aaPredicted RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 VRK3Q8IV63 474 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 CCDC117Q8IWD4 279 aaPredicted RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 FRMD1Q8N878 549 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 NDRG1Q92597 394 aaKnown RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 OTUB2Q96DC9 234 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 RBP7Q96R05 134 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 CIPCQ9C0C6 399 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 PCBD2Q9H0N5 130 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 TLR9Q9NR96 1032 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 DNAJC5BQ9UF47 199 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 BTNL2Q9UIR0 455 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 CAMK2AQ9UQM7 478 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 IQCF5A8MTL0 148 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 C17orf105B2RV13 164 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 GNG7O60262 68 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 ZNF44P15621 663 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 CALCRP30988 508 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 CCL23P55773 120 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 ABI3BPQ7Z7G0 1075 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 BRIX1Q8TDN6 353 aaKnown RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 DPF1Q92782 380 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 TOMM40LQ969M1 308 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 COPS8Q99627 209 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 SLC26A1Q9H2B4 701 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 PIGMQ9H3S5 423 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 FKRPQ9H9S5 495 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 CDK12Q9NYV4 1490 aaPredicted RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 SUV39H1O43463 412 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 CACNG3O60359 315 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 TBX19O60806 448 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 TRUB2O95900 331 aaKnown RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 ACTR1BP42025 376 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 OR3A1P47881 315 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 PITPNBP48739 271 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 ATAT1Q5SQI0 421 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 SUSD4Q5VX71 490 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 FBXO15Q8NCQ5 510 aaPredicted RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 FAM3CQ92520 227 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 HLA-CQ95604 372 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 MOAP1Q96BY2 351 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 YIPF4Q9BSR8 244 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 MRPL37Q9BZE1 423 aaKnown RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 SIX2Q9NPC8 291 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 OR12D3Q9UGF7 316 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 FAM96BQ9Y3D0 163 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 RDH16O75452 317 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 CDKN2BP42772 138 aa8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 NUTF2P61970 127 aaKnown RBP8.55□□□□□ -1.04
GTF2A1-203ENST00000553612 TMEM119Q4V9L6 283 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms