RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 BARX2Q9UMQ3 279 aaPredicted RBP0.2□□□□□ -2.38
COPB1-212ENST00000534771 PCDHGB4Q9UN71 923 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 SLC9A8Q9Y2E8 581 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 RPH3AQ9Y2J0 694 aaPredicted RBP0.2□□□□□ -2.38
COPB1-212ENST00000534771 IFT52Q9Y366 437 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 USP6P35125 1406 aa0.2□□□□□ -2.38
COPB1-212ENST00000534771 ITIH6Q6UXX5 1313 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 SYNJ2O15056 1496 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 SH3PXD2BA1X283 911 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 PSMB11A5LHX3 300 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 C11orf94C9JXX5 98 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 RPL36A-HNRNPH2H7BZ11 118 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 FOXE1O00358 373 aaPredicted RBP0.19□□□□□ -2.38
COPB1-212ENST00000534771 LAD1O00515 517 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 CYB561D2O14569 222 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 EI24O14681 340 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 ADAM20O43506 726 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 CABYRO75952 493 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 CTDNEP1O95476 244 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 ANP32DO95626 131 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 EPOP01588 193 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 PCCBP05166 539 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 FCER2P06734 321 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 STSP08842 583 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 HOXB7P09629 217 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 OR8U8P0C7N1 319 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 CISD3P0C7P0 127 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 EZRP15311 586 aaKnown RBP0.19□□□□□ -2.38
COPB1-212ENST00000534771 LBPP18428 481 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 CYP3A5P20815 502 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 NPY1RP25929 384 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 PRDX3P30048 256 aaKnown RBP0.19□□□□□ -2.38
COPB1-212ENST00000534771 GDI1P31150 447 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 DLSTP36957 453 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 NSFP46459 744 aaKnown RBP0.19□□□□□ -2.38
COPB1-212ENST00000534771 NPBWR1P48145 328 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 PSMD8P48556 350 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 CLNS1AP54105 237 aaKnown RBP0.19□□□□□ -2.38
COPB1-212ENST00000534771 NOP14P78316 857 aaKnown RBP0.19□□□□□ -2.38
COPB1-212ENST00000534771 UBXN1Q04323 297 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 SLC3A1Q07837 685 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 CUL4AQ13619 759 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 TRADDQ15628 312 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 HAGHQ16775 308 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 SHROOM1Q2M3G4 852 aaPredicted RBP0.19□□□□□ -2.38
COPB1-212ENST00000534771 CCDC57Q2TAC2 916 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 CFAP221Q4G0U5 840 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 PAGE3Q5JUK9 113 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 LY6G6FQ5SQ64 297 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 DNLZQ5SXM8 178 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 RAET1LQ5VY80 246 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 CST9LP1Q5W188 147 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 FAM205BPQ63HN1 556 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 PM20D1Q6GTS8 502 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 GALNT17Q6IS24 598 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 STEAP1BQ6NZ63 245 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 FAM180BQ6P0A1 224 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 UNC5DQ6UXZ4 953 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 ADAMTSL5Q6ZMM2 481 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 C4orf50Q6ZRC1 276 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 RNF165Q6ZSG1 346 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 TMEM26Q6ZUK4 368 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 CHST3Q7LGC8 479 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 GPR142Q7Z601 462 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 PI4KAP1Q8N8J0 262 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 CYB561D1Q8N8Q1 229 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 OR9A1PQ8NGU1 263 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 OR52J3Q8NH60 311 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 PHOSPHO2Q8TCD6 241 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 HEXDCQ8WVB3 486 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 PIGCQ92535 297 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 C18orf25Q96B23 403 aaPredicted RBP0.19□□□□□ -2.38
COPB1-212ENST00000534771 SSX3Q99909 188 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 FEM1AQ9BSK4 669 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 LRRC2Q9BYS8 371 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 ABCG8Q9H221 673 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 IFI27L2Q9H2X8 130 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 SH2D2AQ9NP31 389 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 NANSQ9NR45 359 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 MORF4L1Q9UBU8 362 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 TBC1D29Q9UFV1 150 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 ZNF230Q9UIE0 474 aaPredicted RBP0.19□□□□□ -2.38
COPB1-212ENST00000534771 TP53TG5Q9Y2B4 290 aa0.19□□□□□ -2.38
COPB1-212ENST00000534771 MROH7-TTC4A0A0A0MT08 1334 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 MAP3K15Q6ZN16 1313 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 LRRK1Q38SD2 2015 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 GPR179Q6PRD1 2367 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 IGHV7-81A0A0B4J1V7 117 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 ILVBLA1L0T0 632 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 MAGEB16A2A368 324 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 TUBAL3A6NHL2 446 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 C16orf90A8MZG2 172 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 C19orf81C9J6K1 198 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 MSH4O15457 936 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 B4GALT5O43286 388 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 ZNF264O43296 627 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 EFNA2O43921 213 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 DIAPH2O60879 1101 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 CPNE6O95741 557 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 IGHV3-48P01763 117 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms