RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 MRPL19P49406 292 aaKnown RBP13.8□□□□□ -0.2
RNF4-210ENST00000508235 PNLIPRP2P54317 469 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 PSMD4P55036 377 aaKnown RBP13.8□□□□□ -0.2
RNF4-210ENST00000508235 WNT3P56703 355 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 FBXW4P57775 412 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 GPR85P60893 370 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 HBA1P69905 142 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 GUCY1A3Q02108 690 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 EFR3AQ14156 821 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 ELOAQ14241 798 aaKnown RBP13.8□□□□□ -0.2
RNF4-210ENST00000508235 DECR1Q16698 335 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 TMEM198Q66K66 360 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 ZNF324BQ6AW86 544 aaPredicted RBP13.8□□□□□ -0.2
RNF4-210ENST00000508235 PRR22Q8IZ63 422 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 OR2M7Q8NG81 312 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 OR4A15Q8NGL6 344 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 SPPL2AQ8TCT8 520 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 DIO2Q92813 273 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 HOXB13Q92826 284 aaPredicted RBP13.8□□□□□ -0.2
RNF4-210ENST00000508235 TMBIM1Q969X1 311 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 SLC35A4Q96G79 324 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 MARK4Q96L34 752 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 RILPQ96NA2 401 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 COL21A1Q96P44 957 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 OR52E6Q96RD3 313 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 SLX1AQ9BQ83 275 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 RABEP2Q9H5N1 569 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 TMEM45AQ9NWC5 275 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 GIN1Q9NXP7 522 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 BTNL2Q9UIR0 455 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 CBLCQ9ULV8 474 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 BOKQ9UMX3 212 aaPredicted RBP13.8□□□□□ -0.2
RNF4-210ENST00000508235 BOD1L1Q8NFC6 3051 aa13.8□□□□□ -0.2
RNF4-210ENST00000508235 SHANK1Q9Y566 2161 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 KCNH1O95259 989 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 ALOX5P09917 674 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 GABRA3P34903 492 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 SOAT1P35610 550 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 KCNJ2P63252 427 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 PLGLB1Q02325 96 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 SNTA1Q13424 505 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 TP53BP2Q13625 1128 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 IGFBP7Q16270 282 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 KRTCAP3Q53RY4 240 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 MFSD12Q6NUT3 480 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 TMEM81Q6P7N7 255 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 NPSR1Q6W5P4 371 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 BNC2Q6ZN30 1099 aaPredicted RBP13.79□□□□□ -0.2
RNF4-210ENST00000508235 CLECL1Q8IZS7 167 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 CPSF7Q8N684 471 aaKnown RBP13.79□□□□□ -0.2
RNF4-210ENST00000508235 TRIML2Q8N7C3 387 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 ST6GALNAC3Q8NDV1 305 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 GPR151Q8TDV0 419 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 NUDT8Q8WV74 236 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 GIMAP5Q96F15 307 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 TEX37Q96LM6 180 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 DOHHQ9BU89 302 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 CXorf36Q9H7Y0 433 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 RMND5AQ9H871 391 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 METTL7AQ9H8H3 244 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 DEPPQ9NTK1 212 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 MRGBPQ9NV56 204 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 DCTN4Q9UJW0 460 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 CNOT11Q9UKZ1 510 aaKnown RBP13.79□□□□□ -0.2
RNF4-210ENST00000508235 FAF1Q9UNN5 650 aaPredicted RBP13.79□□□□□ -0.2
RNF4-210ENST00000508235 PCDHGB3Q9Y5G1 929 aa13.79□□□□□ -0.2
RNF4-210ENST00000508235 NUP214P35658 2090 aaPredicted RBP13.79□□□□□ -0.2
RNF4-210ENST00000508235 A0A0G2JND7 137 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 FAM234BA2RU67 622 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 TFECO14948 347 aaPredicted RBP13.78□□□□□ -0.2
RNF4-210ENST00000508235 HS6ST1O60243 411 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 SCN2BO60939 215 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 NME6O75414 186 aaPredicted RBP13.78□□□□□ -0.2
RNF4-210ENST00000508235 NKX2-2O95096 273 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 HMGN2P05204 90 aaKnown RBP13.78□□□□□ -0.2
RNF4-210ENST00000508235 UQCRC2P22695 453 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 IL12AP29459 219 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 ATP4BP51164 291 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 POLR2JP52435 117 aaKnown RBP13.78□□□□□ -0.2
RNF4-210ENST00000508235 PMP22Q01453 160 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 PRAMEF20Q5VT98 475 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 METTL21CQ5VZV1 264 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 SLC30A6Q6NXT4 461 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 MSANTD1Q6ZTZ1 278 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 PACS2Q86VP3 889 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 SLC22A16Q86VW1 577 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 SLC9A6Q92581 669 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 JADE3Q92613 823 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 HGDQ93099 445 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 THOC1Q96FV9 657 aaKnown RBP13.78□□□□□ -0.2
RNF4-210ENST00000508235 CCDC115Q96NT0 180 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 PANX1Q96RD7 426 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 STACQ99469 402 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 ANGPTL4Q9BY76 406 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 ACTRT3Q9BYD9 372 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 IL1RL2Q9HB29 575 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 DUSP22Q9NRW4 184 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 FGFR1OP2Q9NVK5 253 aa13.78□□□□□ -0.2
RNF4-210ENST00000508235 B4GALT7Q9UBV7 327 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms