RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 MANSC1Q9H8J5 431 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 ACSS1Q9NUB1 689 aaPredicted RBP11.84□□□□□ -0.51
COL5A1-206ENST00000465877 ATAD3AQ9NVI7 634 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 TINAGQ9UJW2 476 aa11.84□□□□□ -0.51
COL5A1-206ENST00000465877 ICE1Q9Y2F5 2266 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 TRGV8A0A0C4DH27 118 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 A0A1B0GUH1 482 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 ANKRD33BA6NCL7 494 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 OR6C70A6NIJ9 312 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 HMGB1P1B2RPK0 211 aaPredicted RBP11.83□□□□□ -0.52
COL5A1-206ENST00000465877 SDHDO14521 159 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 KLF11O14901 512 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 LAMP1P11279 417 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 PRPS1L1P21108 318 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 IL12BP29460 328 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 MASP1P48740 699 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 DIO3P55073 304 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 MANFP55145 182 aaKnown RBP11.83□□□□□ -0.52
COL5A1-206ENST00000465877 PER3P56645 1201 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 C21orf58P58505 322 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 MLC1Q15049 377 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 C3AR1Q16581 482 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 CPTPQ5TA50 214 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 Q6ZPB1 254 aaPredicted RBP11.83□□□□□ -0.52
COL5A1-206ENST00000465877 WDR53Q7Z5U6 358 aaPredicted RBP11.83□□□□□ -0.52
COL5A1-206ENST00000465877 FGD2Q7Z6J4 655 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 SLC44A2Q8IWA5 706 aaPredicted RBP11.83□□□□□ -0.52
COL5A1-206ENST00000465877 LRRC34Q8IZ02 419 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 SLC35A4Q96G79 324 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 JSRP1Q96MG2 331 aaPredicted RBP11.83□□□□□ -0.52
COL5A1-206ENST00000465877 NODALQ96S42 347 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 METTL7AQ9H8H3 244 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 NEUROD4Q9HD90 331 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 ZFP64Q9NPA5 681 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 EQTNQ9NQ60 294 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 KLRF1Q9NZS2 232 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 ZNF835Q9Y2P0 537 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 OR10H1Q9Y4A9 318 aa11.83□□□□□ -0.52
COL5A1-206ENST00000465877 NUP214P35658 2090 aaPredicted RBP11.83□□□□□ -0.52
COL5A1-206ENST00000465877 A0A1B0GTH9 108 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 PRAMEF25A6NGN4 478 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 HDAC3O15379 428 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 TSPAN2O60636 221 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 ABCB7O75027 752 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 TRIM3O75382 744 aaPredicted RBP11.82□□□□□ -0.52
COL5A1-206ENST00000465877 SASH3O75995 380 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 IGHG3P01860 377 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 CELA3AP09093 270 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 KITP10721 976 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 LBPP18428 481 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 GDF1P27539 372 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 KRT20P35900 424 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 CASP3P42574 277 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 CASP6P55212 293 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 CLDN8P56748 225 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 ZNHIT3Q15649 155 aaPredicted RBP11.82□□□□□ -0.52
COL5A1-206ENST00000465877 OGFOD2Q6N063 350 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 ARHGAP11AQ6P4F7 1023 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 MYO7BQ6PIF6 2116 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 NUP54Q7Z3B4 507 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 CAMKMTQ7Z624 323 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 CD163Q86VB7 1156 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 SPPL2CQ8IUH8 684 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 OR4N2Q8NGD1 307 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 FBXO30Q8TB52 745 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 NUDT8Q8WV74 236 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 EFHD2Q96C19 240 aaPredicted RBP11.82□□□□□ -0.52
COL5A1-206ENST00000465877 COL21A1Q96P44 957 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 ADOQ96SZ5 270 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 LMF2Q9BU23 707 aaKnown RBP11.82□□□□□ -0.52
COL5A1-206ENST00000465877 DUSP26Q9BV47 211 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 ANGPTL4Q9BY76 406 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 BHLHE41Q9C0J9 482 aaPredicted RBP11.82□□□□□ -0.52
COL5A1-206ENST00000465877 DEFB127Q9H1M4 99 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 GALNT9Q9HCQ5 603 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 Q9N2J8 555 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 SIRT3Q9NTG7 399 aaPredicted RBP11.82□□□□□ -0.52
COL5A1-206ENST00000465877 B4GALT7Q9UBV7 327 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 MAPRE3Q9UPY8 281 aa11.82□□□□□ -0.52
COL5A1-206ENST00000465877 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 A0A1W2PRB8 838 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 TRPC5OSA6NMA1 111 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 SLCO1B7G3V0H7 640 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 REM1O75628 298 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 ALDOCP09972 364 aaKnown RBP11.81□□□□□ -0.52
COL5A1-206ENST00000465877 RFPL3SP0C7P2 107 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 EPHA3P29320 983 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 PTGS2P35354 604 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 PTGDSP41222 190 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 PRR5P85299 388 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 EFR3AQ14156 821 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 FNDC7Q5VTL7 733 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 TMEM198Q66K66 360 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 LARP4Q71RC2 724 aaKnown RBP eCLIP11.81□□□□□ -0.52
COL5A1-206ENST00000465877 WDR75Q8IWA0 830 aaKnown RBP11.81□□□□□ -0.52
COL5A1-206ENST00000465877 NATD1Q8N6N6 113 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 NUP43Q8NFH3 380 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 PIWIL2Q8TC59 973 aaKnown RBP11.81□□□□□ -0.52
COL5A1-206ENST00000465877 LRRC8CQ8TDW0 803 aa11.81□□□□□ -0.52
COL5A1-206ENST00000465877 ZNF75CPQ92670 426 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms