RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 ATG101Q9BSB4 218 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 TPSD1Q9BZJ3 242 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 LATS2Q9NRM7 1088 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 SEC14L3Q9UDX4 400 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 C3orf18Q9UK00 162 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 SLC9A8Q9Y2E8 581 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 ZNF451Q9Y4E5 1061 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 LRIT2A6NDA9 550 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 ZNF879B4DU55 563 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 CD3EAPO15446 510 aaKnown RBP5.55□□□□□ -1.52
CLK1-207ENST00000461981 SLC22A3O75751 556 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 CST1P01037 141 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 H2AFB1P0C5Y9 115 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 H2AFB2P0C5Z0 115 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 SLC6A2P23975 617 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 RPIAP49247 311 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 INPP1P49441 399 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 ST8SIA6P61647 398 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 TRAM1Q15629 374 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 FBXO48Q5FWF7 155 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 CDPF1Q6NVV7 123 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 LCLAT1Q6UWP7 414 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 C3P1Q6ZMU1 363 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 RPS27LQ71UM5 84 aaKnown RBP5.55□□□□□ -1.52
CLK1-207ENST00000461981 SLC46A3Q7Z3Q1 461 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 NAA40Q86UY6 237 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 KLBQ86Z14 1044 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 DCUN1D3Q8IWE4 304 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 STX19Q8N4C7 294 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 BOLLQ8N9W6 283 aaKnown RBP5.55□□□□□ -1.52
CLK1-207ENST00000461981 ATP6V1C2Q8NEY4 427 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 RHBDD1Q8TEB9 315 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 GCDHQ92947 438 aaPredicted RBP5.55□□□□□ -1.52
CLK1-207ENST00000461981 WNT2BQ93097 391 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 ISG20Q96AZ6 181 aaKnown RBP5.55□□□□□ -1.52
CLK1-207ENST00000461981 ZBED6CLQ96FA7 236 aaPredicted RBP5.55□□□□□ -1.52
CLK1-207ENST00000461981 BSCL2Q96G97 398 aaPredicted RBP5.55□□□□□ -1.52
CLK1-207ENST00000461981 FAM84AQ96KN4 292 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 MYOCQ99972 504 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 C7orf50Q9BRJ6 194 aaKnown RBP5.55□□□□□ -1.52
CLK1-207ENST00000461981 CNPPD1Q9BV87 410 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 GPR61Q9BZJ8 451 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 SMG9Q9H0W8 520 aaKnown RBP5.55□□□□□ -1.52
CLK1-207ENST00000461981 NMRAL1Q9HBL8 299 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 KLHL9Q9P2J3 617 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 UTS2RQ9UKP6 389 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 CYP8B1Q9UNU6 501 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 NME7Q9Y5B8 376 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 ORC6Q9Y5N6 252 aa5.55□□□□□ -1.52
CLK1-207ENST00000461981 A0A096LPK6 155 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 ARHGEF33A8MVX0 844 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 ISM1B1AKI9 464 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 SOX15O60248 233 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 RAD1O60671 282 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 TMEM127O75204 238 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 IGLV3-25P01717 112 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 ALPIP09923 528 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 HSD17B1P14061 328 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 SPI1P17947 270 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 LMO2P25791 158 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 CD38P28907 300 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 CLDN20P56880 219 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 YPEL5P62699 121 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 CFHR1Q03591 330 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 SQSTM1Q13501 440 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 EIF4EBP2Q13542 120 aaPredicted RBP5.54□□□□□ -1.52
CLK1-207ENST00000461981 FAM189A2Q15884 450 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 RNF212Q495C1 297 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 SEZ6Q53EL9 994 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 KLHL22Q53GT1 634 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 C2orf27AQ580R0 203 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 SFRP5Q5T4F7 317 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 MLIPQ5VWP3 458 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 C8orf82Q6P1X6 216 aaPredicted RBP5.54□□□□□ -1.52
CLK1-207ENST00000461981 DNAJC24Q6P3W2 148 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 SV2AQ7L0J3 742 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 CENPLQ8N0S6 344 aaPredicted RBP5.54□□□□□ -1.52
CLK1-207ENST00000461981 PELI3Q8N2H9 469 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 CDYL2Q8N8U2 506 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 ZSCAN1Q8NBB4 408 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 MOSPD2Q8NHP6 518 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 ZNF516Q92618 1163 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 SLAMF9Q96A28 289 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 MCEEQ96PE7 176 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 SLC38A2Q96QD8 506 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 PKP4Q99569 1192 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 MENTQ9BUN1 341 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 PARD6GQ9BYG4 376 aaPredicted RBP5.54□□□□□ -1.52
CLK1-207ENST00000461981 REEP4Q9H6H4 257 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 GORASP2Q9H8Y8 452 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 PRSS16Q9NQE7 514 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 RBFOX1Q9NWB1 397 aaKnown RBP5.54□□□□□ -1.52
CLK1-207ENST00000461981 SH3BP4Q9P0V3 963 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 ERVW-1Q9UQF0 538 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 MMACHCQ9Y4U1 282 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 GVINP1Q7Z2Y8 2422 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 A0A0J9YYE9 177 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 GLYATL1P3A0A0U1RQE8 302 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 SYNDIG1LA6NDD5 238 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 ANXA2P2A6NMY6 339 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms