RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, human

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-208	ENST00000431611	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	TEX35	Q5T0J7	233 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	EEF1A1P5	Q5VTE0	462 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	FAM219B	Q5XKK7	198 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	PLXDC2	Q6UX71	529 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	GCNT2	Q8N0V5	402 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	TMEM151A	Q8N4L1	468 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CDYL2	Q8N8U2	506 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	SLC35A4	Q96G79	324 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	SFXN2	Q96NB2	322 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	BTBD9	Q96Q07	612 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	G6PC3	Q9BUM1	346 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	PIGM	Q9H3S5	423 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ANKRA2	Q9H9E1	313 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CLCF1	Q9UBD9	225 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	MCM8	Q9UJA3	840 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ZNF225	Q9UK10	706 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	FBXL2	Q9UKC9	423 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	DLGAP4	Q9Y2H0	992 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	WIF1	Q9Y5W5	379 aa		13.74	□□□□□ -0.21
CSNK1E-208	ENST00000431611	AKAP6	Q13023	2319 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	SH3D21	A4FU49	640 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	MANBA	O00462	879 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	PLOD2	O00469	737 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CASK	O14936	926 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	NME6	O75414	186 aa	Predicted RBP	13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	SUPT7L	O94864	414 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	IL3	P08700	152 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CT45A8	P0DMV1	189 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CT45A9	P0DMV2	189 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	DRD2	P14416	443 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CHN1	P15882	459 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	LHX2	P50458	406 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	DIO3	P55073	304 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CORO7	P57737	925 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CSTF3	Q12996	717 aa	Known RBP	13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	EFR3A	Q14156	821 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CT45A2	Q5DJT8	189 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	OR5M10	Q6IEU7	315 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	GRAMD2A	Q8IUY3	354 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	WFDC11	Q8NEX6	87 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	OR9A2	Q8NGT5	310 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	UHMK1	Q8TAS1	419 aa	Known RBP	13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	DCAKD	Q8WVC6	231 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	KAT2A	Q92830	837 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	EXOSC8	Q96B26	276 aa	Known RBP	13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ERP27	Q96DN0	273 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	NEUROD4	Q9HD90	331 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	NDRG3	Q9UGV2	375 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ZNF180	Q9UJW8	692 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	DKKL1	Q9UK85	242 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	PACSIN3	Q9UKS6	424 aa		13.73	□□□□□ -0.21
CSNK1E-208	ENST00000431611	KIAA1549	Q9HCM3	1950 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	GNG14	A0A1W2PPG7	69 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611		A8MXE2	369 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	PCDH7	O60245	1069 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	TSPAN2	O60636	221 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ULK1	O75385	1050 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	SNRPA	P09012	282 aa	Known RBP	13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ZNF708	P17019	499 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	TAC1	P20366	129 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	TCEA1	P23193	301 aa	Known RBP	13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	IL12B	P29460	328 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CLDN18	P56856	261 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	PSPH	P78330	225 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	HEPACAM	Q14CZ8	416 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	RASA2	Q15283	850 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ERCC6L	Q2NKX8	1250 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	UNC50	Q53HI1	259 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	LARP4	Q71RC2	724 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	GBP7	Q8N8V2	638 aa	Predicted RBP	13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	METTL6	Q8TCB7	284 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	IFT81	Q8WYA0	676 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	SMPDL3B	Q92485	455 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	VSTM2L	Q96N03	204 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	FMO2	Q99518	471 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	GIMAP4	Q9NUV9	329 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	DMGDH	Q9UI17	866 aa	Known RBP	13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ABCA4	P78363	2273 aa		13.72	□□□□□ -0.21
CSNK1E-208	ENST00000431611	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.71	□□□□□ -0.21
CSNK1E-208	ENST00000431611		A0A1W2PNV4	684 aa		13.71	□□□□□ -0.21
CSNK1E-208	ENST00000431611		A0A1W2PPR1	153 aa		13.71	□□□□□ -0.21
CSNK1E-208	ENST00000431611	HCRTR2	O43614	444 aa		13.71	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ZIC3	O60481	467 aa		13.71	□□□□□ -0.21
CSNK1E-208	ENST00000431611	TNFSF13	O75888	250 aa		13.71	□□□□□ -0.21
CSNK1E-208	ENST00000431611	TGM6	O95932	706 aa		13.71	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CD53	P19397	219 aa		13.71	□□□□□ -0.21
CSNK1E-208	ENST00000431611	GRK2	P25098	689 aa		13.71	□□□□□ -0.21
CSNK1E-208	ENST00000431611	DPP4	P27487	766 aa		13.71	□□□□□ -0.21
CSNK1E-208	ENST00000431611	HMOX2	P30519	316 aa		13.71	□□□□□ -0.21
CSNK1E-208	ENST00000431611	HOXC12	P31275	282 aa		13.71	□□□□□ -0.21
CSNK1E-208	ENST00000431611	CPOX	P36551	454 aa		13.71	□□□□□ -0.21
CSNK1E-208	ENST00000431611	PNLIPRP2	P54317	469 aa		13.71	□□□□□ -0.21
CSNK1E-208	ENST00000431611	RAE1	P78406	368 aa	Known RBP	13.71	□□□□□ -0.21
CSNK1E-208	ENST00000431611	MRPS22	P82650	360 aa	Known RBP	13.71	□□□□□ -0.21
CSNK1E-208	ENST00000431611	BCL2A1	Q16548	175 aa		13.71	□□□□□ -0.21
CSNK1E-208	ENST00000431611	ZNF678	Q5SXM1	525 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms