RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 CDRT4Q8N9R6 151 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 CLIP3Q96DZ5 547 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 OSBPL10Q9BXB5 764 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 FOLH1BQ9HBA9 442 aa20.57■□□□□ 0.88
VSX1-205ENST00000429762 PDP1Q9P0J1 537 aaPredicted RBP20.57■□□□□ 0.88
VSX1-205ENST00000429762 CENPVL1A0A0U1RR11 272 aa20.56■□□□□ 0.88
VSX1-205ENST00000429762 ALPPP05187 535 aa20.56■□□□□ 0.88
VSX1-205ENST00000429762 ZNF883P0CG24 379 aa20.56■□□□□ 0.88
VSX1-205ENST00000429762 MERTKQ12866 999 aa20.56■□□□□ 0.88
VSX1-205ENST00000429762 DEF8Q6ZN54 512 aa20.56■□□□□ 0.88
VSX1-205ENST00000429762 HIPK1Q86Z02 1210 aa20.56■□□□□ 0.88
VSX1-205ENST00000429762 CHERPQ8IWX8 916 aaKnown RBP20.56■□□□□ 0.88
VSX1-205ENST00000429762 ZNF321PQ8N8H1 164 aa20.56■□□□□ 0.88
VSX1-205ENST00000429762 TFAP2CQ92754 450 aa20.56■□□□□ 0.88
VSX1-205ENST00000429762 ZNF354BQ96LW1 612 aa20.56■□□□□ 0.88
VSX1-205ENST00000429762 OR1F2PQ96R84 312 aa20.56■□□□□ 0.88
VSX1-205ENST00000429762 ENPP4Q9Y6X5 453 aa20.56■□□□□ 0.88
VSX1-205ENST00000429762 DSPPQ9NZW4 1301 aa20.56■□□□□ 0.88
VSX1-205ENST00000429762 PRKNO60260 465 aaPredicted RBP20.55■□□□□ 0.88
VSX1-205ENST00000429762 MITFO75030 526 aaPredicted RBP20.55■□□□□ 0.88
VSX1-205ENST00000429762 ETS2P15036 469 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 FPR1P21462 350 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 RFX3P48380 749 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 EMDP50402 254 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 TXNL4AP83876 142 aaKnown RBP20.55■□□□□ 0.88
VSX1-205ENST00000429762 RHAGQ02094 409 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 NNATQ16517 81 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 ARHGAP11BQ3KRB8 267 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 DCST2Q5T1A1 773 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 TYW3Q6IPR3 259 aaKnown RBP20.55■□□□□ 0.88
VSX1-205ENST00000429762 RHBDD2Q6NTF9 364 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 DBX2Q6ZNG2 339 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 MARVELD2Q8N4S9 558 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 AMER2Q8N7J2 671 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 SDF2Q99470 211 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 BTBD2Q9BX70 525 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 C8orf4Q9NR00 106 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 SRPK3Q9UPE1 567 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 LYVE1Q9Y5Y7 322 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 C17orf105B2RV13 164 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 TNFRSF11BO00300 401 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 CDX4O14627 284 aaPredicted RBP20.55■□□□□ 0.88
VSX1-205ENST00000429762 FRS3O43559 492 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 COQ9O75208 318 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 SEMA7AO75326 666 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 THRBP10828 461 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 GPR68Q15743 365 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 ZNF311Q5JNZ3 666 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 YOD1Q5VVQ6 348 aaPredicted RBP20.55■□□□□ 0.88
VSX1-205ENST00000429762 GALNT5Q7Z7M9 940 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 OR4N2Q8NGD1 307 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 GPR55Q9Y2T6 319 aaPredicted RBP20.55■□□□□ 0.88
VSX1-205ENST00000429762 WDR45Q9Y484 360 aa20.55■□□□□ 0.88
VSX1-205ENST00000429762 HEMK1Q9Y5R4 338 aaPredicted RBP20.55■□□□□ 0.88
VSX1-205ENST00000429762 FLRT2O43155 660 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 AGR2O95994 175 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 PABPC4LP0CB38 370 aaKnown RBP20.54■□□□□ 0.88
VSX1-205ENST00000429762 MAP3K8P41279 467 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 IL1RL1Q01638 556 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 KCNC4Q03721 635 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 SERTAD2Q14140 314 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 SWT1Q5T5J6 900 aaKnown RBP20.54■□□□□ 0.88
VSX1-205ENST00000429762 FAAH2Q6GMR7 532 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 LAIR1Q6GTX8 287 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 ZAR1Q86SH2 424 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 LSRQ86X29 649 aaPredicted RBP20.54■□□□□ 0.88
VSX1-205ENST00000429762 RMND5BQ96G75 393 aaPredicted RBP20.54■□□□□ 0.88
VSX1-205ENST00000429762 MBOAT4Q96T53 435 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 PIP5K1AQ99755 562 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 RBM4BQ9BQ04 359 aaKnown RBP20.54■□□□□ 0.88
VSX1-205ENST00000429762 RBM4Q9BWF3 364 aaKnown RBP20.54■□□□□ 0.88
VSX1-205ENST00000429762 TOR3AQ9H497 397 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 CALML5Q9NZT1 146 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 MKL2Q9ULH7 1088 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 FAM32AQ9Y421 112 aaKnown RBP20.54■□□□□ 0.88
VSX1-205ENST00000429762 MMACHCQ9Y4U1 282 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 PCDHGB2Q9Y5G2 931 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 CLDN24A6NM45 220 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 FFAR1O14842 300 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 CLPSP04118 112 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 ITGA2P17301 1181 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 ACP1P24666 158 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 CSTF2P33240 577 aaKnown RBP eCLIP20.54■□□□□ 0.88
VSX1-205ENST00000429762 DAPP51397 102 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 MAPK10P53779 464 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 CLDN6P56747 220 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 EXOC3L2Q2M3D2 409 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 PRAMEF8Q5VWM4 474 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 PRAMEF7Q5VXH5 474 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 UGT2A3Q6UWM9 527 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 QSOX2Q6ZRP7 698 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 OFCC1Q8IZS5 231 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 OR52P1PQ8NH57 321 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 PTPMT1Q8WUK0 201 aaPredicted RBP20.54■□□□□ 0.88
VSX1-205ENST00000429762 GATA6Q92908 595 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 ZNF347Q96SE7 839 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 EPYCQ99645 322 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 SPATA5L1Q9BVQ7 753 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 PRR14Q9BWN1 585 aa20.54■□□□□ 0.88
VSX1-205ENST00000429762 DUSP22Q9NRW4 184 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms