RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 GRK2P25098 689 aa18.6■□□□□ 0.57
GTF3A-202ENST00000419181 MAPK1P28482 360 aa18.6■□□□□ 0.57
GTF3A-202ENST00000419181 FRKP42685 505 aaPredicted RBP18.6■□□□□ 0.57
GTF3A-202ENST00000419181 MAN2A2P49641 1150 aa18.6■□□□□ 0.57
GTF3A-202ENST00000419181 ABCE1P61221 599 aaKnown RBP18.6■□□□□ 0.57
GTF3A-202ENST00000419181 PSG6Q00889 435 aa18.6■□□□□ 0.57
GTF3A-202ENST00000419181 ZNF155Q12901 538 aaPredicted RBP18.6■□□□□ 0.57
GTF3A-202ENST00000419181 ZNF551Q7Z340 670 aaPredicted RBP18.6■□□□□ 0.57
GTF3A-202ENST00000419181 PACS2Q86VP3 889 aa18.6■□□□□ 0.57
GTF3A-202ENST00000419181 ZNF781Q8N8C0 355 aa18.6■□□□□ 0.57
GTF3A-202ENST00000419181 CIDECQ96AQ7 238 aaPredicted RBP18.6■□□□□ 0.57
GTF3A-202ENST00000419181 MTERF3Q96E29 417 aa18.6■□□□□ 0.57
GTF3A-202ENST00000419181 SLC35A4Q96G79 324 aa18.6■□□□□ 0.57
GTF3A-202ENST00000419181 TMEM41AQ96HV5 264 aa18.6■□□□□ 0.57
GTF3A-202ENST00000419181 COL21A1Q96P44 957 aa18.6■□□□□ 0.57
GTF3A-202ENST00000419181 C20orf27Q9GZN8 174 aa18.6■□□□□ 0.57
GTF3A-202ENST00000419181 UBQLN3Q9H347 655 aa18.6■□□□□ 0.57
GTF3A-202ENST00000419181 TP63Q9H3D4 680 aaPredicted RBP18.6■□□□□ 0.57
GTF3A-202ENST00000419181 METTL7AQ9H8H3 244 aa18.6■□□□□ 0.57
GTF3A-202ENST00000419181 TRGV5A0A0B4J1U4 118 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 BCKDKO14874 412 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 ABCB7O75027 752 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 REM1O75628 298 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 SNUPNO95149 360 aaKnown RBP18.59■□□□□ 0.57
GTF3A-202ENST00000419181 ENDOUP21128 410 aaKnown RBP18.59■□□□□ 0.57
GTF3A-202ENST00000419181 PTGDSP41222 190 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 MASP1P48740 699 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 SMSP52788 366 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 HSPB3Q12988 150 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 SNTA1Q13424 505 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 ART3Q13508 389 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 ZNF787Q6DD87 383 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 SLC30A6Q6NXT4 461 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 XKRXQ6PP77 449 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 SLC44A2Q8IWA5 706 aaPredicted RBP18.59■□□□□ 0.57
GTF3A-202ENST00000419181 LIX1Q8N485 282 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 ZBED6CLQ96FA7 236 aaPredicted RBP18.59■□□□□ 0.57
GTF3A-202ENST00000419181 SORT1Q99523 831 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 LDAHQ9H6V9 325 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 SH3BP4Q9P0V3 963 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 HAO1Q9UJM8 370 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.59■□□□□ 0.57
GTF3A-202ENST00000419181 C15orf41Q9Y2V0 281 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 RAP2CQ9Y3L5 183 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 CRYBG3Q68DQ2 2970 aa18.59■□□□□ 0.57
GTF3A-202ENST00000419181 CACNA1CQ13936 2221 aa18.58■□□□□ 0.57
GTF3A-202ENST00000419181 PHF3Q92576 2039 aaKnown RBP18.58■□□□□ 0.56
GTF3A-202ENST00000419181 TSPAN2O60636 221 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 BGNP21810 368 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 GDF1P27539 372 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 DCTP40126 519 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 SLC1A6P48664 564 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 PTGR1Q14914 329 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 GXYLT1Q4G148 440 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 TIGD3Q6B0B8 471 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 R3HCC1LQ7Z5L2 792 aaKnown RBP18.58■□□□□ 0.56
GTF3A-202ENST00000419181 MARVELD2Q8N4S9 558 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 FNDC5Q8NAU1 212 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 OR4N2Q8NGD1 307 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 ZFP28Q8NHY6 868 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 TUBGCP3Q96CW5 907 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 ADOQ96SZ5 270 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 C1orf50Q9BV19 199 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 OSBPL11Q9BXB4 747 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 PNPLA3Q9NST1 481 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 ACSS1Q9NUB1 689 aaPredicted RBP18.58■□□□□ 0.56
GTF3A-202ENST00000419181 SPRR3Q9UBC9 169 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 TNFRSF10DQ9UBN6 386 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 ATP6V1HQ9UI12 483 aa18.58■□□□□ 0.56
GTF3A-202ENST00000419181 KLF2Q9Y5W3 355 aaPredicted RBP18.58■□□□□ 0.56
GTF3A-202ENST00000419181 TMEM120BA0PK00 339 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 PRAMEF25A6NGN4 478 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 SCAMP2O15127 329 aaKnown RBP18.57■□□□□ 0.56
GTF3A-202ENST00000419181 ICOSLGO75144 302 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 PRPS2P11908 318 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 ELAVL4P26378 380 aaKnown RBP18.57■□□□□ 0.56
GTF3A-202ENST00000419181 PTPN6P29350 595 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 KRT20P35900 424 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 HPCAL1P37235 193 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 PNLIPRP2P54317 469 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 EFR3AQ14156 821 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 IL23RQ5VWK5 629 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 LARP4Q71RC2 724 aaKnown RBP eCLIP18.57■□□□□ 0.56
GTF3A-202ENST00000419181 NEIL3Q8TAT5 605 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 RNF138Q8WVD3 245 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 SARAFQ96BY9 339 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 TMCO6Q96DC7 493 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 GNRHR2Q96P88 292 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 LMF2Q9BU23 707 aaKnown RBP18.57■□□□□ 0.56
GTF3A-202ENST00000419181 SLC6A15Q9H2J7 730 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 EXO5Q9H790 373 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 GALNT9Q9HCQ5 603 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 KLRF1Q9NZS2 232 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 OR10H1Q9Y4A9 318 aa18.57■□□□□ 0.56
GTF3A-202ENST00000419181 CELSR2Q9HCU4 2923 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 SNPHO15079 494 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 HPNP05981 417 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 IL12BP29460 328 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 GPC1P35052 558 aa18.56■□□□□ 0.56
GTF3A-202ENST00000419181 RPL3P39023 403 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms