RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 H3BTX0 84 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 SGK494L7N484 410 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 SLC17A2O00624 439 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 RAMP1O60894 148 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 DUSP14O95147 198 aaKnown RBP2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 LY6G6DO95868 133 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 IGHG3P01860 377 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 PROS1P07225 676 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 RALAP11233 206 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 LAMP1P11279 417 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 STMN1P16949 149 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 KLK2P20151 261 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 GDF1P27539 372 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 MDH2P40926 338 aaKnown RBP2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 XCR1P46094 333 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 RGRP47804 291 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 STK19P49842 368 aaPredicted RBP2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 EMDP50402 254 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 LYZP61626 148 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 MYBPC1Q00872 1141 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 ZNF33BQ06732 778 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 ASAH1Q13510 395 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 SNX1Q13596 522 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 GAMTQ14353 236 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 KIAA0040Q15053 153 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 CAMK4Q16566 473 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 AGKQ53H12 422 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 CYBRD1Q53TN4 286 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 LGSNQ5TDP6 509 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 SEL1L2Q5TEA6 688 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 MEDAGQ5VYS4 303 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 LEG1Q6P5S2 330 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 PAQR9Q6ZVX9 377 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 P4HA3Q7Z4N8 544 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 AMZ2Q86W34 360 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 APOBEC3FQ8IUX4 373 aaKnown RBP2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 C11orf53Q8IXP5 236 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 CENPSQ8N2Z9 138 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 GPR137CQ8N3F9 429 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 ZNF397Q8NF99 534 aaPredicted RBP2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 WDR36Q8NI36 951 aaKnown RBP2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 RFESDQ8TAC1 157 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 FAF2Q96CS3 445 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 B3GALT6Q96L58 329 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 WRAP53Q9BUR4 548 aaKnown RBP2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 CARD6Q9BX69 1037 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 HCAR1Q9BXC0 346 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 DEFB126Q9BYW3 111 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 ELOVL4Q9GZR5 314 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 ABCG8Q9H221 673 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 SYTL2Q9HCH5 934 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 EXOSC3Q9NQT5 275 aaKnown RBP2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 MBD2Q9UBB5 411 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 FZR1Q9UM11 496 aa2.04□□□□□ -2.08
RNU6-48P-201ENST00000384161 ABCC9O60706 1549 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 RPGRIP1LQ68CZ1 1315 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 IGHV3-35A0A0C4DH35 117 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 A0A0U1RRA0 63 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 TMEM89A2RUT3 159 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 CFAP73A6NFT4 308 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 TNFSF11O14788 317 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 TSC22D2O75157 780 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 WNT2P09544 360 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 PTPN4P29074 926 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 OR1D4P47884 311 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 P2RY4P51582 365 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 RAG2P55895 527 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 CXCL6P80162 114 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 SRYQ05066 204 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 WASHC5Q12768 1159 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 TGIF1Q15583 401 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 ZNF699Q32M78 642 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 LRIT3Q3SXY7 679 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 RNF212Q495C1 297 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 PAN3Q58A45 887 aaKnown RBP2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 BEND6Q5SZJ8 279 aaPredicted RBP2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 DCST2Q5T1A1 773 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 ZNF658Q5TYW1 1059 aaPredicted RBP2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 METTL11BQ5VVY1 283 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 SLC22A10Q63ZE4 541 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 ADAMTSL5Q6ZMM2 481 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 NET1Q7Z628 596 aaPredicted RBP2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 CADM2Q8N3J6 435 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 NEK11Q8NG66 645 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 SLC13A3Q8WWT9 602 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 BADQ92934 168 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 CCDC47Q96A33 483 aaKnown RBP2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 PINX1Q96BK5 328 aaKnown RBP2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 RAB3CQ96E17 227 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 CYYR1Q96J86 154 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 SPATA13Q96N96 652 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 SPXQ9BT56 116 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 NMNAT2Q9BZQ4 307 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 SIRPDQ9H106 197 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 POLD4Q9HCU8 107 aa2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 DCAF13Q9NV06 445 aaKnown RBP2.03□□□□□ -2.08
RNU6-48P-201ENST00000384161 ADAM22Q9P0K1 906 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms