RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 ZNHIT3Q15649 155 aaPredicted RBP13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 MAPK11Q15759 364 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 VMACQ2NL98 169 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 CT45A2Q5DJT8 189 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 RPS26P11Q5JNZ5 115 aaPredicted RBP13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 CCNJQ5T5M9 372 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 HSDL2Q6YN16 418 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 RAB43Q86YS6 212 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 COX18Q8N8Q8 333 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 SLC38A5Q8WUX1 472 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 VMP1Q96GC9 406 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 RAB3IPQ96QF0 476 aaPredicted RBP13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 LMF2Q9BU23 707 aaKnown RBP13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 FAM117AQ9C073 453 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 SEMA4CQ9C0C4 833 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 NXF5Q9H1B4 397 aaKnown RBP13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 PIGUQ9H490 435 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 POMPQ9Y244 141 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 FREM2Q5SZK8 3169 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 CFAP73A6NFT4 308 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 A8MVJ9 347 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 PEX12O00623 359 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 KLK10O43240 276 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 SLC28A2O43868 658 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 NKX2-2O95096 273 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 ARAFP10398 606 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 NR2F1P10589 423 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 PRKAR1AP10644 381 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 HTR1EP28566 365 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 ANXA11P50995 505 aaKnown RBP13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 CDK6Q00534 326 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 CACNA1BQ00975 2339 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 Q0VFX4 171 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 FUT5Q11128 374 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 SCARB2Q14108 478 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 TRIM25Q14258 630 aaKnown RBP13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 ATAD3BQ5T9A4 648 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 HLA-DQA1Q5Y7H0 255 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 ZCCHC12Q6PEW1 402 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 CYP2R1Q6VVX0 501 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 SLC29A4Q7RTT9 530 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 C16orf62Q7Z3J2 963 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 ZSCAN1Q8NBB4 408 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 C11orf65Q8NCR3 313 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 FAM13CQ8NE31 585 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 WDR60Q8WVS4 1066 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 KCNE4Q8WWG9 221 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 FIG4Q92562 907 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 ADIPOR1Q96A54 375 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 RMND5BQ96G75 393 aaPredicted RBP13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 LMF1Q96S06 567 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 WWTR1Q9GZV5 400 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 TMEM38AQ9H6F2 299 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 A4GALTQ9NPC4 353 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 FBXO34Q9NWN3 711 aa13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 GPR55Q9Y2T6 319 aaPredicted RBP13.07□□□□□ -0.32
HERPUD1-203ENST00000379792 ANKRD11Q6UB99 2663 aaPredicted RBP13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 A0A1W2PQ72 361 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 DUXAA6NLW8 204 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 OR6C76A6NM76 312 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 A8MUI8 341 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 PPICP45877 212 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 RFX3P48380 749 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 CLCN2P51788 898 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 NR0B1P51843 470 aaKnown RBP13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 EXT1Q16394 746 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 SPATS1Q496A3 300 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 GPAT3Q53EU6 434 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 PLAG1Q6DJT9 500 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 FIGNL1Q6PIW4 674 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 HMGN2P46Q86SG4 172 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 PRR22Q8IZ63 422 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 HIPK4Q8NE63 616 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 HOXB13Q92826 284 aaPredicted RBP13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 TMEM19Q96HH6 336 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 DUSP22Q9NRW4 184 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 GIN1Q9NXP7 522 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 SUCOQ9UBS9 1254 aaKnown RBP13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 CFL2Q9Y281 166 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 OR10H1Q9Y4A9 318 aa13.06□□□□□ -0.32
HERPUD1-203ENST00000379792 APC2O95996 2303 aa13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 DMXL2Q8TDJ6 3036 aa13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 C5orf58C9J3I9 102 aa13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 WWP2O00308 870 aa13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 CXCR6O00574 342 aa13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 ACOT8O14734 319 aa13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 ARPC2O15144 300 aa13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 ASNA1O43681 348 aa13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 CIB2O75838 187 aa13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 HPP00738 406 aa13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 CHRM4P08173 479 aa13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 GGT1P19440 569 aa13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 PCGF2P35227 344 aa13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 MAGEA8P43361 318 aa13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 ST13P50502 369 aaKnown RBP13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 POU6F2P78424 691 aaPredicted RBP13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 ZNF630Q2M218 657 aaPredicted RBP13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 C1orf146Q5VVC0 180 aa13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 GLYATQ6IB77 296 aa13.05□□□□□ -0.32
HERPUD1-203ENST00000379792 ERICH5Q6P6B1 374 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms