RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 MPIG6BO95866 241 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 USP53Q70EK8 1073 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 BAGE3Q86Y29 109 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 BAGE2Q86Y30 109 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 CMIPQ8IY22 773 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 DNAJC19Q96DA6 116 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 HAPLN3Q96S86 360 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 SLC2A4RGQ9NR83 387 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 PCDHGA1Q9Y5H4 931 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 UBIAD1Q9Y5Z9 338 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 SERPINF1P36955 418 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 PRMT2P55345 433 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 SEC61A1P61619 476 aaKnown RBP15.63■□□□□ 0.09
PTCH1-201ENST00000331920 ARG2P78540 354 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 ZNF585AQ6P3V2 769 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 ZNF783Q6ZMS7 281 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 PEX11GQ96HA9 241 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 CCDC74BQ96LY2 380 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 A0A1W2PS29 197 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 BMP4P12644 408 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 NSDHLQ15738 373 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 KIAA1211LQ6NV74 962 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 IL20RBQ6UXL0 311 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 TMEM59Q9BXS4 323 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 CD244Q9BZW8 370 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 DTLQ9NZJ0 730 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 SLC23A2Q9UGH3 650 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 RIPK3Q9Y572 518 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 ATRNL1Q5VV63 1379 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 DCDC2BA2VCK2 349 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 TBX10O75333 385 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 TMEM41BQ5BJD5 291 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 COQ5Q5HYK3 327 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 PLBD1Q6P4A8 553 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 CMTM8Q8IZV2 173 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 OR51L1Q8NGJ5 315 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 OR9A4Q8NGU2 314 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 FAM120CQ9NX05 1096 aaKnown RBP15.63■□□□□ 0.09
PTCH1-201ENST00000331920 USP36Q9P275 1121 aaKnown RBP15.63■□□□□ 0.09
PTCH1-201ENST00000331920 NLKQ9UBE8 527 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 MAGEB4O15481 346 aaPredicted RBP15.63■□□□□ 0.09
PTCH1-201ENST00000331920 UEVLDQ8IX04 471 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 C1orf127Q8N9H9 656 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 FUCA2Q9BTY2 467 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 OR6C2Q9NZP2 312 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 ACVRL1P37023 503 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 FPGSQ05932 587 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 SLC14A2Q15849 920 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 ZNRF4Q8WWF5 429 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 MYH7BA7E2Y1 1941 aa15.63■□□□□ 0.09
PTCH1-201ENST00000331920 A0A1W2PPW3 197 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 C2orf78A6NCI8 922 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 GJE1A6NN92 205 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 FBXO45P0C2W1 286 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 JUPP14923 745 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 SLC35A2P78381 396 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 ELOCQ15369 112 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 MEDAGQ5VYS4 303 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 AGTRAPQ6RW13 159 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 ZNF765Q7L2R6 523 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 CREB3L4Q8TEY5 395 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 TSACCQ96A04 125 aaPredicted RBP15.62■□□□□ 0.09
PTCH1-201ENST00000331920 INPP4AQ96PE3 977 aaPredicted RBP15.62■□□□□ 0.09
PTCH1-201ENST00000331920 OCSTAMPQ9BR26 566 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 B3GNT3Q9Y2A9 372 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 GABRDO14764 452 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 VEGFDO43915 354 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 APEHP13798 732 aaKnown RBP15.62■□□□□ 0.09
PTCH1-201ENST00000331920 ACTBP60709 375 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 ACTG1P63261 375 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 FAM199XQ6PEV8 388 aaPredicted RBP15.62■□□□□ 0.09
PTCH1-201ENST00000331920 TMEM173Q86WV6 379 aaPredicted RBP15.62■□□□□ 0.09
PTCH1-201ENST00000331920 CELF5Q8N6W0 485 aaKnown RBP15.62■□□□□ 0.09
PTCH1-201ENST00000331920 BPIFCQ8NFQ6 507 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 REEP4Q9H6H4 257 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 TXNL4BQ9NX01 149 aaKnown RBP15.62■□□□□ 0.09
PTCH1-201ENST00000331920 M6PRP20645 277 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 POU4F2Q12837 409 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 GPR33Q49SQ1 333 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 LRRC55Q6ZSA7 311 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 CDKN2AIPNLQ96HQ2 116 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 MMP27Q9H306 513 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 CDC42BPAQ5VT25 1732 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 ANKRD30BLA7E2S9 258 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 OR2T1O43869 369 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 SCAPQ12770 1279 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 DAZLQ92904 295 aaKnown RBP15.62■□□□□ 0.09
PTCH1-201ENST00000331920 VPS25Q9BRG1 176 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 WWTR1Q9GZV5 400 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 TCRBV7S3A2A0A539 114 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 PCSK2P16519 638 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 RORAP35398 523 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 TGM4P49221 684 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 C1orf61Q13536 156 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 PRAMEF8Q5VWM4 474 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 PRAMEF7Q5VXH5 474 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 LIPJQ5W064 366 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 CES4AQ5XG92 561 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 CD163Q86VB7 1156 aa15.62■□□□□ 0.09
PTCH1-201ENST00000331920 LRR1Q96L50 414 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms