RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 IKBIPQ70UQ0 350 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 FAM9CQ8IZT9 166 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 FAM83FQ8NEG4 500 aaPredicted RBP16.18■□□□□ 0.18
HDDC3-201ENST00000330334 ZPLD1Q8TCW7 415 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 KAT2AQ92830 837 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 DTNBP1Q96EV8 351 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 WDYHV1Q96HA8 205 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 BBS4Q96RK4 519 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 EBPLQ9BY08 206 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 CALHM2Q9HA72 323 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 MYNNQ9NPC7 610 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 RRAGDQ9NQL2 400 aaPredicted RBP16.18■□□□□ 0.18
HDDC3-201ENST00000330334 KLRF1Q9NZS2 232 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 SLC6A5Q9Y345 797 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 CCL27Q9Y4X3 112 aa16.18■□□□□ 0.18
HDDC3-201ENST00000330334 COPEO14579 308 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 DVL2O14641 736 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 REM1O75628 298 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 IFI6P09912 130 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 CPN1P15169 458 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 KRT4P19013 534 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 GCKP35557 465 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 SLCO1A2P46721 670 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 PNLIPRP2P54317 469 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 DLX5P56178 289 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 MRPS22P82650 360 aaKnown RBP16.17■□□□□ 0.18
HDDC3-201ENST00000330334 KIAA0040Q15053 153 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 TOMM20Q15388 145 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 FBXL19-AS1Q494R0 122 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 WIPI1Q5MNZ9 446 aaPredicted RBP16.17■□□□□ 0.18
HDDC3-201ENST00000330334 LIPMQ5VYY2 423 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 OR7G2Q8NG99 324 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 ZNF559Q9BR84 538 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 TRMOQ9BU70 441 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 OR2B2Q9GZK3 357 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 ANKRA2Q9H9E1 313 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 FOLH1BQ9HBA9 442 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 GALNT9Q9HCQ5 603 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 MID2Q9UJV3 735 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 L3MBTL1Q9Y468 752 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 TEP1Q99973 2627 aaKnown RBP16.17■□□□□ 0.18
HDDC3-201ENST00000330334 AKAP9Q99996 3911 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 EXPH5Q8NEV8 1989 aa16.17■□□□□ 0.18
HDDC3-201ENST00000330334 ANKRD17O75179 2603 aaKnown RBP16.16■□□□□ 0.18
HDDC3-201ENST00000330334 FREM3P0C091 2139 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 ANKHD1Q8IWZ3 2542 aaKnown RBP16.16■□□□□ 0.18
HDDC3-201ENST00000330334 MBD3L4A6NDZ8 208 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-201ENST00000330334 MBD3L3A6NE82 208 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-201ENST00000330334 MBD3L5A6NJ08 208 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-201ENST00000330334 COQ9O75208 318 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 CRCPO75575 148 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 IL2RAP01589 272 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 KRT20P35900 424 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 CORO7P57737 925 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 CYP27C1Q4G0S4 372 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 NOXRED1Q6NXP6 359 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 POMZP3Q6PJE2 187 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 ARSKQ6UWY0 536 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 NPSR1Q6W5P4 371 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 WDR53Q7Z5U6 358 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-201ENST00000330334 PLCZ1Q86YW0 608 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 TNIP2Q8NFZ5 429 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 MBD3L2Q8NHZ7 208 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-201ENST00000330334 LRRC46Q96FV0 321 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 ZNF764Q96H86 408 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-201ENST00000330334 UCN2Q96RP3 112 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 ADOQ96SZ5 270 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 MIEF1Q9NQG6 463 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 SENP1Q9P0U3 644 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 FOXD3Q9UJU5 478 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-201ENST00000330334 C19orf53Q9UNZ5 99 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-201ENST00000330334 CAMK2AQ9UQM7 478 aa16.16■□□□□ 0.18
HDDC3-201ENST00000330334 PSMG1O95456 288 aa16.15■□□□□ 0.18
HDDC3-201ENST00000330334 IL18BPO95998 194 aa16.15■□□□□ 0.18
HDDC3-201ENST00000330334 SRD5A2P31213 254 aa16.15■□□□□ 0.18
HDDC3-201ENST00000330334 NCBP2P52298 156 aaKnown RBP eCLIP16.15■□□□□ 0.18
HDDC3-201ENST00000330334 PSG6Q00889 435 aa16.15■□□□□ 0.18
HDDC3-201ENST00000330334 TESK1Q15569 626 aa16.15■□□□□ 0.18
HDDC3-201ENST00000330334 PRSS53Q2L4Q9 553 aa16.15■□□□□ 0.18
HDDC3-201ENST00000330334 LARP4Q71RC2 724 aaKnown RBP eCLIP16.15■□□□□ 0.18
HDDC3-201ENST00000330334 YRDCQ86U90 279 aaKnown RBP16.15■□□□□ 0.18
HDDC3-201ENST00000330334 CDH24Q86UP0 819 aa16.15■□□□□ 0.18
HDDC3-201ENST00000330334 OR2L13Q8N349 312 aa16.15■□□□□ 0.18
HDDC3-201ENST00000330334 NAXEQ8NCW5 288 aa16.15■□□□□ 0.18
HDDC3-201ENST00000330334 EPS8L3Q8TE67 593 aaKnown RBP16.15■□□□□ 0.18
HDDC3-201ENST00000330334 TNFRSF12AQ9NP84 129 aa16.15■□□□□ 0.18
HDDC3-201ENST00000330334 SERHLQ9NQF3 203 aa16.15■□□□□ 0.18
HDDC3-201ENST00000330334 MKS1Q9NXB0 559 aa16.15■□□□□ 0.18
HDDC3-201ENST00000330334 WIF1Q9Y5W5 379 aa16.15■□□□□ 0.18
HDDC3-201ENST00000330334 C2orf72A6NCS6 295 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 SLC28A1O00337 649 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 POU3F2P20265 443 aaPredicted RBP16.14■□□□□ 0.17
HDDC3-201ENST00000330334 IL12BP29460 328 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 ASCL1P50553 236 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 GAS1P54826 345 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 GFRA1P56159 465 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 MYBPHQ13203 477 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 RCAN2Q14206 197 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 DCST1Q5T197 706 aa16.14■□□□□ 0.17
HDDC3-201ENST00000330334 ENPP6Q6UWR7 440 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms