RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 RAB43Q86YS6 212 aa11.82□□□□□ -0.52
UBXN4-201ENST00000272638 CPOQ8IVL8 374 aa11.82□□□□□ -0.52
UBXN4-201ENST00000272638 OR5T3Q8NGG3 340 aa11.82□□□□□ -0.52
UBXN4-201ENST00000272638 OR52E4Q8NGH9 312 aa11.82□□□□□ -0.52
UBXN4-201ENST00000272638 WDR92Q96MX6 357 aa11.82□□□□□ -0.52
UBXN4-201ENST00000272638 C17orf113A0A1B0GUU1 675 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 DUXAA6NLW8 204 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 SGK494L7N484 410 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 HMGN4O00479 90 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 KHNYNO15037 678 aaKnown RBP11.81□□□□□ -0.52
UBXN4-201ENST00000272638 RPP14O95059 124 aaKnown RBP11.81□□□□□ -0.52
UBXN4-201ENST00000272638 JUNBP17275 347 aaPredicted RBP11.81□□□□□ -0.52
UBXN4-201ENST00000272638 AKT2P31751 481 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 SDC2P34741 201 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 MPEG1Q2M385 716 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 LRIT3Q3SXY7 679 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 SLC30A8Q8IWU4 369 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 LRRC25Q8N386 305 aaPredicted RBP11.81□□□□□ -0.52
UBXN4-201ENST00000272638 SUN3Q8TAQ9 357 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 VMP1Q96GC9 406 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 OR7D2Q96RA2 312 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 WACQ9BTA9 647 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 SLC7A7Q9UM01 511 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 GVINP1Q7Z2Y8 2422 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 ZDBF2Q9HCK1 2354 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 C5orf42Q9H799 3197 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 OR2A25A4D2G3 310 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 NCR1O76036 304 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 ATP5A1P25705 553 aaKnown RBP11.81□□□□□ -0.52
UBXN4-201ENST00000272638 MTNR1AP48039 350 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 PPP2CBP62714 309 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 PPP2CAP67775 309 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 RPA4Q13156 261 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 SYT6Q5T7P8 510 aaPredicted RBP11.81□□□□□ -0.52
UBXN4-201ENST00000272638 PRPF38BQ5VTL8 546 aaKnown RBP11.81□□□□□ -0.52
UBXN4-201ENST00000272638 ADGRF3Q8IZF5 1079 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 LINC01555Q8NAE3 123 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 OR2L5Q8NG80 312 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 OR2L3Q8NG85 312 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 RPLP0P6Q8NHW5 317 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 SLC38A3Q99624 504 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 SAP130Q9H0E3 1048 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 GPATCH2Q9NW75 528 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 ZNF226Q9NYT6 803 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 IKZF2Q9UKS7 526 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 ZFR2Q9UPR6 939 aaKnown RBP11.81□□□□□ -0.52
UBXN4-201ENST00000272638 CENPXA8MT69 81 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 PRKYO43930 277 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 CXCR4P61073 352 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 SCN1BQ07699 218 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 UBXN2BQ14CS0 331 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 BCL7AQ4VC05 210 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 HLA-DQA1Q5Y7H0 255 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 ZNF367Q7RTV3 350 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 CCDC71Q8IV32 467 aaPredicted RBP11.81□□□□□ -0.52
UBXN4-201ENST00000272638 Q8N9G6 341 aaPredicted RBP11.81□□□□□ -0.52
UBXN4-201ENST00000272638 SYT14Q8NB59 555 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 ZNF563Q8TA94 476 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 SMAP2Q8WU79 429 aaPredicted RBP11.81□□□□□ -0.52
UBXN4-201ENST00000272638 SNX33Q8WV41 574 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 PIGKQ92643 395 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 PEX11GQ96HA9 241 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 NELL2Q99435 816 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 CD180Q99467 661 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 PLA2G2FQ9BZM2 168 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 MMP28Q9H239 520 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 SMURF1Q9HCE7 757 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 ANKHQ9HCJ1 492 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 PNO1Q9NRX1 252 aaKnown RBP11.81□□□□□ -0.52
UBXN4-201ENST00000272638 CALML5Q9NZT1 146 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 PCDHGB6Q9Y5F9 930 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 MAU2Q9Y6X3 613 aa11.81□□□□□ -0.52
UBXN4-201ENST00000272638 LRIT2A6NDA9 550 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 RIIAD1A6NNX1 92 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 BLOC1S5-TXNDC5H3BN57 136 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 HOXC11O43248 304 aaPredicted RBP11.8□□□□□ -0.52
UBXN4-201ENST00000272638 RDH16O75452 317 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 RAB36O95755 333 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 MMP11P24347 488 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 BLVRAP53004 296 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 ZNF33BQ06732 778 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 CCDC92Q53HC0 331 aaPredicted RBP11.8□□□□□ -0.52
UBXN4-201ENST00000272638 ACSM5Q6NUN0 579 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 MTFR2Q6P444 385 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 SLC16A12Q6ZSM3 486 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 PARP16Q8N5Y8 322 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 OR5M3Q8NGP4 307 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 RFKQ969G6 155 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 COQ7Q99807 217 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 PRSS38A1L453 326 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 DRD2P14416 443 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 FUT1P19526 365 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 XCR1P46094 333 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 SHHQ15465 462 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 FLYWCH1Q4VC44 716 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 STEAP3Q658P3 488 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 LAS2Q8IYD9 372 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 CRIPAKQ8N1N5 446 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 CAMKVQ8NCB2 501 aa11.8□□□□□ -0.52
UBXN4-201ENST00000272638 ANKK1Q8NFD2 765 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 518.7 ms