RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 PGCP20142 388 aa15.81■□□□□ 0.12
PHRF1-201ENST00000264555 AK4P27144 223 aaPredicted RBP15.81■□□□□ 0.12
PHRF1-201ENST00000264555 CTBSQ01459 385 aa15.81■□□□□ 0.12
PHRF1-201ENST00000264555 HSD17B12Q53GQ0 312 aa15.81■□□□□ 0.12
PHRF1-201ENST00000264555 TMEM164Q5U3C3 297 aa15.81■□□□□ 0.12
PHRF1-201ENST00000264555 TANGO2Q6ICL3 276 aa15.81■□□□□ 0.12
PHRF1-201ENST00000264555 ZNF761Q86XN6 746 aaPredicted RBP15.81■□□□□ 0.12
PHRF1-201ENST00000264555 CCDC107Q8WV48 283 aa15.81■□□□□ 0.12
PHRF1-201ENST00000264555 TMEM14AQ9Y6G1 99 aa15.81■□□□□ 0.12
PHRF1-201ENST00000264555 NAA10P41227 235 aaPredicted RBP15.81■□□□□ 0.12
PHRF1-201ENST00000264555 TNFRSF4P43489 277 aa15.81■□□□□ 0.12
PHRF1-201ENST00000264555 EMX1Q04741 257 aaPredicted RBP15.81■□□□□ 0.12
PHRF1-201ENST00000264555 RPE65Q16518 533 aa15.81■□□□□ 0.12
PHRF1-201ENST00000264555 PLBD1Q6P4A8 553 aa15.81■□□□□ 0.12
PHRF1-201ENST00000264555 JAGN1Q8N5M9 183 aa15.81■□□□□ 0.12
PHRF1-201ENST00000264555 PNLDC1Q8NA58 520 aaKnown RBP15.81■□□□□ 0.12
PHRF1-201ENST00000264555 TOR1AIP2Q8NFQ8 470 aa15.81■□□□□ 0.12
PHRF1-201ENST00000264555 GTPBP2Q9BX10 602 aaKnown RBP15.81■□□□□ 0.12
PHRF1-201ENST00000264555 PLOD2O00469 737 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 PLD2O14939 933 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 RGS9O75916 674 aaPredicted RBP15.8■□□□□ 0.12
PHRF1-201ENST00000264555 DPP6P42658 865 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 CD83Q01151 205 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 TMEM52BQ4KMG9 183 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 ZNF782Q6ZMW2 699 aaPredicted RBP15.8■□□□□ 0.12
PHRF1-201ENST00000264555 B3GNT8Q7Z7M8 397 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 HORMAD2Q8N7B1 307 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 CITED4Q96RK1 184 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 TPSD1Q9BZJ3 242 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 MBD2Q9UBB5 411 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 CA14Q9ULX7 337 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 SLC7A7Q9UM01 511 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 METTL21EPA6NDL7 271 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 SBK3P0C264 359 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 DEFB110Q30KQ9 67 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 KCTD18Q6PI47 426 aaPredicted RBP15.8■□□□□ 0.12
PHRF1-201ENST00000264555 ALDH16A1Q8IZ83 802 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 POLE4Q9NR33 117 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 NANSQ9NR45 359 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 C14orf119Q9NWQ9 140 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 NFKBIL1Q9UBC1 381 aaPredicted RBP15.8■□□□□ 0.12
PHRF1-201ENST00000264555 LRRN3E7EW58 273 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 PRKYO43930 277 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 CDK1P06493 297 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 CASRP41180 1078 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 NFATC4Q14934 902 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 FAM189A2Q15884 450 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 PUS10Q3MIT2 529 aaKnown RBP15.8■□□□□ 0.12
PHRF1-201ENST00000264555 B3GNT7Q8NFL0 401 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 CNN2Q99439 309 aaKnown RBP15.8■□□□□ 0.12
PHRF1-201ENST00000264555 PHOX2BQ99453 314 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 LRRN3Q9H3W5 708 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 CNIH4Q9P003 139 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 PRRC2BQ5JSZ5 2229 aaKnown RBP15.8■□□□□ 0.12
PHRF1-201ENST00000264555 KLK8O60259 260 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 KCNK5O95279 499 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 NUDT1P36639 197 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 SOX9P48436 509 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 SERTAD2Q14140 314 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 ZNF77Q15935 545 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 ODF4Q2M2E3 257 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 NHSL2Q5HYW2 709 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 ANKRD13BQ86YJ7 626 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 PIGUQ9H490 435 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 GRIP1Q9Y3R0 1128 aa15.8■□□□□ 0.12
PHRF1-201ENST00000264555 LINC01553A4QN01 128 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 TARM1B6A8C7 271 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 C11orf98E9PRG8 122 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 FURINP09958 794 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 SPATC1Q76KD6 591 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 SAMD8Q96LT4 415 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 CCDC32Q9BV29 185 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 CNOT2Q9NZN8 540 aaKnown RBP15.79■□□□□ 0.12
PHRF1-201ENST00000264555 SCO2O43819 266 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 MAB21L1Q13394 359 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 FRMPD2BQ6IN97 320 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 MS4A15Q8N5U1 240 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 LMNTD1Q8N9Z9 388 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 SLC37A3Q8NCC5 494 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 NDNFQ8TB73 568 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 ZFP90Q8TF47 636 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 HAVCR1Q96D42 359 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 ACOT13Q9NPJ3 140 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 THAP10Q9P2Z0 257 aaPredicted RBP15.79■□□□□ 0.12
PHRF1-201ENST00000264555 EPHA6Q9UF33 1036 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 ARRB2P32121 409 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 WNT4P56705 351 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 APOFQ13790 326 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 CCDC80Q76M96 950 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 OR6C4Q8NGE1 309 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 ACOT12Q8WYK0 555 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 RFT1Q96AA3 541 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 ALOXE3Q9BYJ1 711 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 CHIAQ9BZP6 476 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 EIF3KQ9UBQ5 218 aaKnown RBP15.79■□□□□ 0.12
PHRF1-201ENST00000264555 PFDN2Q9UHV9 154 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 CD207Q9UJ71 328 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 CD8B2A6NJW9 211 aa15.79■□□□□ 0.12
PHRF1-201ENST00000264555 POLR1CO15160 346 aaPredicted RBP15.79■□□□□ 0.12
PHRF1-201ENST00000264555 HOXC11O43248 304 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms