RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 FLNBO75369 2602 aaKnown RBP16.47■□□□□ 0.23
SNRPA1-201ENST00000254193 CCL21O00585 134 aa16.46■□□□□ 0.23
SNRPA1-201ENST00000254193 DDX5P17844 614 aaKnown RBP16.46■□□□□ 0.23
SNRPA1-201ENST00000254193 PTGS2P35354 604 aa16.46■□□□□ 0.23
SNRPA1-201ENST00000254193 PRKAG1P54619 331 aa16.46■□□□□ 0.23
SNRPA1-201ENST00000254193 CASP6P55212 293 aa16.46■□□□□ 0.23
SNRPA1-201ENST00000254193 CLDN8P56748 225 aa16.46■□□□□ 0.23
SNRPA1-201ENST00000254193 OCRLQ01968 901 aa16.46■□□□□ 0.23
SNRPA1-201ENST00000254193 SLC10A1Q14973 349 aa16.46■□□□□ 0.23
SNRPA1-201ENST00000254193 TMEM198Q66K66 360 aa16.46■□□□□ 0.23
SNRPA1-201ENST00000254193 Q6ZPB1 254 aaPredicted RBP16.46■□□□□ 0.23
SNRPA1-201ENST00000254193 LARP4Q71RC2 724 aaKnown RBP eCLIP16.46■□□□□ 0.235e-6■□□□□ 10.3
SNRPA1-201ENST00000254193 WDR75Q8IWA0 830 aaKnown RBP16.46■□□□□ 0.23
SNRPA1-201ENST00000254193 ZNF75CPQ92670 426 aaPredicted RBP16.46■□□□□ 0.23
SNRPA1-201ENST00000254193 COQ8BQ96D53 544 aa16.46■□□□□ 0.23
SNRPA1-201ENST00000254193 COL21A1Q96P44 957 aa16.46■□□□□ 0.23
SNRPA1-201ENST00000254193 VIPAS39Q9H9C1 493 aa16.46■□□□□ 0.23
SNRPA1-201ENST00000254193 A0A1W2PRB8 838 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 C2orf72A6NCS6 295 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 OR6C70A6NIJ9 312 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 SDHDO14521 159 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 TSPAN2O60636 221 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 ZG16O60844 167 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 SNX4O95219 450 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 IFI6P09912 130 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 LBPP18428 481 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 KRT20P35900 424 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 MASP1P48740 699 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 PER3P56645 1201 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 GAB1Q13480 694 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 FNDC7Q5VTL7 733 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 ARHGAP11AQ6P4F7 1023 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 C3P1Q6ZMU1 363 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 SZRD1Q7Z422 152 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 PACS2Q86VP3 889 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 GOLGA6L1Q8N7Z2 621 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 EFHD2Q96C19 240 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 SLC35A4Q96G79 324 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 ZNF597Q96LX8 424 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 PRPF18Q99633 342 aaKnown RBP16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 WDR55Q9H6Y2 383 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 ZNF703Q9H7S9 590 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 GALNT9Q9HCQ5 603 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 ATAD3AQ9NVI7 634 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 HECTD1Q9ULT8 2610 aa16.45■□□□□ 0.22
SNRPA1-201ENST00000254193 GOLGA8QA0A0J9YX86 632 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 A1L4Q6 167 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 GOLGA8OA6NCC3 632 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 PRAMEF25A6NGN4 478 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 GOLGA8NF8WBI6 632 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 HDAC3O15379 428 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 ICOSLGO75144 302 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 SASH3O75995 380 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 IGHG3P01860 377 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 IL12BP29460 328 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 GABRA3P34903 492 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 PTGDSP41222 190 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 C21orf58P58505 322 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 MLC1Q15049 377 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 ZNHIT3Q15649 155 aaPredicted RBP16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 PGS1Q32NB8 556 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 CYP27C1Q4G0S4 372 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 PAOXQ6QHF9 649 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 TRILQ7L0X0 811 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 DOLPP1Q86YN1 238 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 NUP43Q8NFH3 380 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 CEP70Q8NHQ1 597 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 FBXO30Q8TB52 745 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 NTNG2Q96CW9 530 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 TMCO6Q96DC7 493 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 GNRHR2Q96P88 292 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 LMF2Q9BU23 707 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 DUSP26Q9BV47 211 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 C3orf14Q9HBI5 128 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 SIRT3Q9NTG7 399 aaPredicted RBP16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 KLRF1Q9NZS2 232 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 NTMQ9P121 344 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 TNFRSF10DQ9UBN6 386 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 HIVEP3Q5T1R4 2406 aa16.44■□□□□ 0.22
SNRPA1-201ENST00000254193 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 GXYLT2A0PJZ3 443 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 NPIPA2E9PIF3 369 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 NPIPA3F8WFD2 350 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 PRRG2O14669 202 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 GNB5O14775 395 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 KLF11O14901 512 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 EMC8O43402 210 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 ABCB7O75027 752 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 C6orf47O95873 294 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 TPOP07202 933 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 GDF1P27539 372 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 EPHA3P29320 983 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 PSPHP78330 225 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 TIGD3Q6B0B8 471 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 SLC30A6Q6NXT4 461 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 TMEM81Q6P7N7 255 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 ANGPTL8Q6UXH0 198 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 CD163Q86VB7 1156 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 FAM57AQ8TBR7 257 aa16.43■□□□□ 0.22
SNRPA1-201ENST00000254193 OR5P2Q8WZ92 322 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms