RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Dnase2bQ9QY48 354 aa13.9□□□□□ -0.18
Nup88-202ENSMUST00000108530 Adam18Q9R157 719 aa13.9□□□□□ -0.18
Nup88-202ENSMUST00000108530 Zscan12Q9Z1D7 501 aa13.9□□□□□ -0.18
Nup88-202ENSMUST00000108530 Olfr1375A0A0N4SUP0 313 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Slc25a34A2ADF7 318 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Pgbd5D3YZI9 523 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 5430401F13RikE9Q328 175 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Gm10477F6SW83 55 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Srsf5O35326 269 aaKnown RBP13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Clk3O35492 638 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Stk16O88697 305 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 P01809 118 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Slc2a2P14246 523 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Bmp8aP34821 399 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Hsf2P38533 535 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Gm1604bQ3TRG0 118 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 SctrQ5FWI2 447 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Olfr1275Q7TQY8 312 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Olfr406Q7TRX0 323 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Olfr297Q7TS07 310 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Serinc5Q8BHJ6 461 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Pi15Q8BS03 258 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Yod1Q8CB27 343 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Vmn1r219Q8R271 312 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Irak4Q8R4K2 459 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Ash2lQ91X20 623 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Lyrm1Q9CQB7 122 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Q9CZV2 255 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Fabp12Q9DAK4 132 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Armc8Q9DBR3 673 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Apbb2Q9DBR4 760 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Chst11Q9JME2 352 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Spry4Q9WTP2 300 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Spag17Q5S003 2320 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Lrrk1Q3UHC2 2014 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Gm35315A0A1B0GRI2 571 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Cela3aA2A9U8 283 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Gm8374L7N2A9 172 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Ppt2O35448 302 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Nudt19P11930 357 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Bmp4P21275 408 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 RxrgP28705 463 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Gbx2P48031 348 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Fgf17P63075 216 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 FhP97807 507 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Nr1h2Q60644 446 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Nxph1Q61200 271 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Runx1t1Q61909 577 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Chst14Q80V53 376 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Mup21Q80YX8 181 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Zc3h14Q8BJ05 735 aaKnown RBP13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Itih5Q8BJD1 952 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Hs3st3a1Q8BKN6 393 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Arhgap28Q8BN58 729 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Gpr157Q8C206 330 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Ppwd1Q8CEC6 646 aaKnown RBP13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Gabarapl1Q8R3R8 117 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 ScgnQ91WD9 276 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Sh3bp4Q921I6 962 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Grip1Q925T6 1127 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Yipf2Q99LP8 312 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Rnf138Q9CQE0 245 aaKnown RBP13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Pex13Q9D0K1 405 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Hacl1Q9QXE0 581 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Dmxl1Q6PNC0 3013 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Gtf3c1Q8K284 2101 aa13.89□□□□□ -0.19
Nup88-202ENSMUST00000108530 Zfp300A2AE21 645 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 BC051665E9Q623 330 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Gm21976J3QNN2 249 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Vmn1r170K7N6W9 304 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 HpnO35453 436 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Cdk5r2O35926 369 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 AvpP35455 168 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Stt3aP46978 705 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 CntfP51642 198 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Sox1P53783 391 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Mmp7Q10738 264 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Trappc13Q3TIR1 417 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 1700066B19RikQ3TS39 127 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Fam196aQ3USH1 422 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Nutm2Q3V0C3 733 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Il18r1Q61098 537 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Rab3ipQ68EF0 428 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Fam131aQ8BWU3 361 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Vps9d1Q8C190 649 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Gulp1Q8K2A1 304 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Neto1Q8R4I7 533 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Tada1Q99LM9 335 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Bcl10Q9Z0H7 233 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Slc9a6A1L3P4 702 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Hsd17b10O08756 261 aaKnown RBP13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Ica1P97411 478 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Inf2Q0GNC1 1273 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Atf7ip2Q3UL97 452 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Kctd21Q3URF8 260 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Aldh16a1Q571I9 802 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Eif1aQ60872 144 aaKnown RBP13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Map4k2Q61161 821 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 Prkd1Q62101 918 aa13.88□□□□□ -0.19
Nup88-202ENSMUST00000108530 WdcpQ6NV72 663 aa13.88□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms