Protein–RNA interactions for Protein: Q8R271

Vmn1r219, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r219Q8R271 Gm25239-201ENSMUST00000174915 86 ntBASIC36.88■■■■□ 3.49
Vmn1r219Q8R271 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
Vmn1r219Q8R271 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Vmn1r219Q8R271 Gm15042-201ENSMUST00000120212 883 ntBASIC32.29■■■□□ 2.76
Vmn1r219Q8R271 Gm24109-201ENSMUST00000175489 103 ntBASIC31.91■■■□□ 2.7
Vmn1r219Q8R271 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Vmn1r219Q8R271 Gm15045-201ENSMUST00000117359 883 ntBASIC31.52■■■□□ 2.64
Vmn1r219Q8R271 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Vmn1r219Q8R271 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Vmn1r219Q8R271 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Vmn1r219Q8R271 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Vmn1r219Q8R271 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
Vmn1r219Q8R271 Gm23366-201ENSMUST00000175022 89 ntBASIC30.85■■■□□ 2.53
Vmn1r219Q8R271 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Vmn1r219Q8R271 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Vmn1r219Q8R271 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Vmn1r219Q8R271 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.91■■■□□ 2.38
Vmn1r219Q8R271 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Vmn1r219Q8R271 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
Vmn1r219Q8R271 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.77■■■□□ 2.36
Vmn1r219Q8R271 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Vmn1r219Q8R271 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.57■■■□□ 2.32
Vmn1r219Q8R271 Psd-208ENSMUST00000224556 2034 ntBASIC29.51■■■□□ 2.31
Vmn1r219Q8R271 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.48■■■□□ 2.31
Vmn1r219Q8R271 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Vmn1r219Q8R271 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
Vmn1r219Q8R271 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Vmn1r219Q8R271 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Vmn1r219Q8R271 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Vmn1r219Q8R271 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Vmn1r219Q8R271 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Vmn1r219Q8R271 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.25■■■□□ 2.27
Vmn1r219Q8R271 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Vmn1r219Q8R271 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Vmn1r219Q8R271 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.13■■■□□ 2.25
Vmn1r219Q8R271 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Vmn1r219Q8R271 Gm25238-201ENSMUST00000174914 89 ntBASIC29.07■■■□□ 2.24
Vmn1r219Q8R271 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Vmn1r219Q8R271 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Vmn1r219Q8R271 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.76■■■□□ 2.19
Vmn1r219Q8R271 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Vmn1r219Q8R271 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.55■■■□□ 2.16
Vmn1r219Q8R271 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Vmn1r219Q8R271 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Vmn1r219Q8R271 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Vmn1r219Q8R271 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.44■■■□□ 2.14
Vmn1r219Q8R271 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Vmn1r219Q8R271 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Vmn1r219Q8R271 Gm27325-201ENSMUST00000175467 74 ntBASIC28.28■■■□□ 2.12
Vmn1r219Q8R271 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Vmn1r219Q8R271 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.24■■■□□ 2.11
Vmn1r219Q8R271 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.22■■■□□ 2.11
Vmn1r219Q8R271 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.09
Vmn1r219Q8R271 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.12■■■□□ 2.09
Vmn1r219Q8R271 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Vmn1r219Q8R271 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.98■■■□□ 2.07
Vmn1r219Q8R271 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Vmn1r219Q8R271 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.95■■■□□ 2.06
Vmn1r219Q8R271 Gm25262-201ENSMUST00000174934 133 ntBASIC27.91■■■□□ 2.06
Vmn1r219Q8R271 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Vmn1r219Q8R271 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Vmn1r219Q8R271 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Vmn1r219Q8R271 Rab21-202ENSMUST00000218831 843 ntBASIC27.78■■■□□ 2.04
Vmn1r219Q8R271 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Vmn1r219Q8R271 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.69■■■□□ 2.02
Vmn1r219Q8R271 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Vmn1r219Q8R271 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.66■■■□□ 2.02
Vmn1r219Q8R271 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Vmn1r219Q8R271 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.56■■■□□ 2
Vmn1r219Q8R271 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Vmn1r219Q8R271 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.52■■■□□ 2
Vmn1r219Q8R271 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Vmn1r219Q8R271 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.48■■□□□ 1.99
Vmn1r219Q8R271 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.47■■□□□ 1.99
Vmn1r219Q8R271 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Vmn1r219Q8R271 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Vmn1r219Q8R271 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Vmn1r219Q8R271 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.41■■□□□ 1.98
Vmn1r219Q8R271 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
Vmn1r219Q8R271 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Vmn1r219Q8R271 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Vmn1r219Q8R271 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Vmn1r219Q8R271 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.35■■□□□ 1.97
Vmn1r219Q8R271 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Vmn1r219Q8R271 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Vmn1r219Q8R271 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.31■■□□□ 1.96
Vmn1r219Q8R271 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Vmn1r219Q8R271 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.22■■□□□ 1.95
Vmn1r219Q8R271 Gm26115-201ENSMUST00000175605 87 ntBASIC27.19■■□□□ 1.94
Vmn1r219Q8R271 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Vmn1r219Q8R271 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Vmn1r219Q8R271 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Vmn1r219Q8R271 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.11■■□□□ 1.93
Vmn1r219Q8R271 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.11■■□□□ 1.93
Vmn1r219Q8R271 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Vmn1r219Q8R271 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Vmn1r219Q8R271 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Vmn1r219Q8R271 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.04■■□□□ 1.92
Vmn1r219Q8R271 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Vmn1r219Q8R271 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms