RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 KITP10721 976 aa20.15■□□□□ 0.82
HOMER3-206ENST00000594439 DDX5P17844 614 aaKnown RBP20.15■□□□□ 0.82
HOMER3-206ENST00000594439 PRPS1L1P21108 318 aa20.15■□□□□ 0.82
HOMER3-206ENST00000594439 DNASE1L1P49184 302 aa20.15■□□□□ 0.82
HOMER3-206ENST00000594439 TMED10P49755 219 aaKnown RBP20.15■□□□□ 0.82
HOMER3-206ENST00000594439 CDK9P50750 372 aaKnown RBP20.15■□□□□ 0.82
HOMER3-206ENST00000594439 MANFP55145 182 aaKnown RBP20.15■□□□□ 0.82
HOMER3-206ENST00000594439 CORO7P57737 925 aa20.15■□□□□ 0.82
HOMER3-206ENST00000594439 PPP2R2AP63151 447 aa20.15■□□□□ 0.82
HOMER3-206ENST00000594439 FOXO1Q12778 655 aa20.15■□□□□ 0.82
HOMER3-206ENST00000594439 GK5Q6ZS86 529 aa20.15■□□□□ 0.82
HOMER3-206ENST00000594439 SPPL2AQ8TCT8 520 aa20.15■□□□□ 0.82
HOMER3-206ENST00000594439 COQ8BQ96D53 544 aa20.15■□□□□ 0.82
HOMER3-206ENST00000594439 OMA1Q96E52 524 aa20.15■□□□□ 0.82
HOMER3-206ENST00000594439 MAGED4Q96JG8 741 aa20.15■□□□□ 0.82
HOMER3-206ENST00000594439 DDX18Q9NVP1 670 aaKnown RBP20.15■□□□□ 0.82
HOMER3-206ENST00000594439 NINQ8N4C6 2090 aa20.15■□□□□ 0.82
HOMER3-206ENST00000594439 SLCO1B7G3V0H7 640 aa20.14■□□□□ 0.81
HOMER3-206ENST00000594439 TP53I11O14683 189 aa20.14■□□□□ 0.81
HOMER3-206ENST00000594439 ASNA1O43681 348 aa20.14■□□□□ 0.81
HOMER3-206ENST00000594439 GLSO94925 669 aaPredicted RBP20.14■□□□□ 0.81
HOMER3-206ENST00000594439 ZIC2O95409 532 aaPredicted RBP20.14■□□□□ 0.81
HOMER3-206ENST00000594439 EFNA1P20827 205 aaPredicted RBP20.14■□□□□ 0.81
HOMER3-206ENST00000594439 ZNF155Q12901 538 aaPredicted RBP20.14■□□□□ 0.81
HOMER3-206ENST00000594439 KRTCAP3Q53RY4 240 aa20.14■□□□□ 0.81
HOMER3-206ENST00000594439 CPTPQ5TA50 214 aa20.14■□□□□ 0.81
HOMER3-206ENST00000594439 PRAMEF20Q5VT98 475 aa20.14■□□□□ 0.81
HOMER3-206ENST00000594439 OGFOD2Q6N063 350 aa20.14■□□□□ 0.81
HOMER3-206ENST00000594439 SLC34A3Q8N130 599 aa20.14■□□□□ 0.81
HOMER3-206ENST00000594439 SECISBP2Q96T21 854 aaKnown RBP20.14■□□□□ 0.81
HOMER3-206ENST00000594439 TUBA8Q9NY65 449 aaPredicted RBP20.14■□□□□ 0.81
HOMER3-206ENST00000594439 ANKRD33BA6NCL7 494 aa20.13■□□□□ 0.81
HOMER3-206ENST00000594439 TRPC5OSA6NMA1 111 aa20.13■□□□□ 0.81
HOMER3-206ENST00000594439 TFECO14948 347 aaPredicted RBP20.13■□□□□ 0.81
HOMER3-206ENST00000594439 GPC1P35052 558 aa20.13■□□□□ 0.81
HOMER3-206ENST00000594439 PSG6Q00889 435 aa20.13■□□□□ 0.81
HOMER3-206ENST00000594439 PLCXD2Q0VAA5 305 aa20.13■□□□□ 0.81
HOMER3-206ENST00000594439 MLC1Q15049 377 aa20.13■□□□□ 0.81
HOMER3-206ENST00000594439 DESI1Q6ICB0 168 aa20.13■□□□□ 0.81
HOMER3-206ENST00000594439 BNC2Q6ZN30 1099 aaPredicted RBP20.13■□□□□ 0.81
HOMER3-206ENST00000594439 MAVSQ7Z434 540 aa20.13■□□□□ 0.81
HOMER3-206ENST00000594439 CAMKMTQ7Z624 323 aa20.13■□□□□ 0.81
HOMER3-206ENST00000594439 FAM26EQ8N5C1 309 aa20.13■□□□□ 0.81
HOMER3-206ENST00000594439 PIWIL2Q8TC59 973 aaKnown RBP20.13■□□□□ 0.81
HOMER3-206ENST00000594439 HGDQ93099 445 aa20.13■□□□□ 0.81
HOMER3-206ENST00000594439 TMBIM1Q969X1 311 aa20.13■□□□□ 0.81
HOMER3-206ENST00000594439 TTTY12Q9BZ98 90 aa20.13■□□□□ 0.81
HOMER3-206ENST00000594439 WDR55Q9H6Y2 383 aaPredicted RBP20.13■□□□□ 0.81
HOMER3-206ENST00000594439 IL1RL2Q9HB29 575 aa20.13■□□□□ 0.81
HOMER3-206ENST00000594439 ATAD3AQ9NVI7 634 aa20.13■□□□□ 0.81
HOMER3-206ENST00000594439 NTMQ9P121 344 aa20.13■□□□□ 0.81
HOMER3-206ENST00000594439 OSGIN2Q9Y236 505 aa20.13■□□□□ 0.81
HOMER3-206ENST00000594439 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.13■□□□□ 0.81
HOMER3-206ENST00000594439 A0A1W2PRB8 838 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 FAM166BA8MTA8 275 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 ZNF195O14628 629 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 ANKRD28O15084 1053 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 HS6ST1O60243 411 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 SEMA7AO75326 666 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 ALDOCP09972 364 aaKnown RBP20.12■□□□□ 0.81
HOMER3-206ENST00000594439 EPHA3P29320 983 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 PPIAP62937 165 aaKnown RBP20.12■□□□□ 0.81
HOMER3-206ENST00000594439 PLGLB1Q02325 96 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 UBAP2LQ14157 1087 aaKnown RBP20.12■□□□□ 0.81
HOMER3-206ENST00000594439 HYAL4Q2M3T9 481 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 CMPK2Q5EBM0 449 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 BICRALQ6AI39 1079 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 NUP54Q7Z3B4 507 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 SLC44A2Q8IWA5 706 aaPredicted RBP20.12■□□□□ 0.81
HOMER3-206ENST00000594439 NATD1Q8N6N6 113 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 LRRC8CQ8TDW0 803 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 DIO2Q92813 273 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 NTNG2Q96CW9 530 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 MAELQ96JY0 434 aaKnown RBP20.12■□□□□ 0.81
HOMER3-206ENST00000594439 C7orf26Q96N11 449 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 PRPF18Q99633 342 aaKnown RBP20.12■□□□□ 0.81
HOMER3-206ENST00000594439 SIRT3Q9NTG7 399 aaPredicted RBP20.12■□□□□ 0.81
HOMER3-206ENST00000594439 INTS9Q9NV88 658 aaKnown RBP20.12■□□□□ 0.81
HOMER3-206ENST00000594439 MAPRE3Q9UPY8 281 aa20.12■□□□□ 0.81
HOMER3-206ENST00000594439 NUP214P35658 2090 aaPredicted RBP20.11■□□□□ 0.81
HOMER3-206ENST00000594439 GOLGA8QA0A0J9YX86 632 aa20.11■□□□□ 0.81
HOMER3-206ENST00000594439 GOLGA8OA6NCC3 632 aa20.11■□□□□ 0.81
HOMER3-206ENST00000594439 GOLGA8NF8WBI6 632 aa20.11■□□□□ 0.81
HOMER3-206ENST00000594439 KCNJ2P63252 427 aa20.11■□□□□ 0.81
HOMER3-206ENST00000594439 PSPHP78330 225 aa20.11■□□□□ 0.81
HOMER3-206ENST00000594439 RPP38P78345 283 aaKnown RBP20.11■□□□□ 0.81
HOMER3-206ENST00000594439 HSF1Q00613 529 aa20.11■□□□□ 0.81
HOMER3-206ENST00000594439 TBCELQ5QJ74 424 aa20.11■□□□□ 0.81
HOMER3-206ENST00000594439 RGS9BPQ6ZS82 235 aa20.11■□□□□ 0.81
HOMER3-206ENST00000594439 SPATA19Q7Z5L4 167 aa20.11■□□□□ 0.81
HOMER3-206ENST00000594439 WDR53Q7Z5U6 358 aaPredicted RBP20.11■□□□□ 0.81
HOMER3-206ENST00000594439 CHERPQ8IWX8 916 aaKnown RBP20.11■□□□□ 0.81
HOMER3-206ENST00000594439 TMEM251Q8N6I4 163 aa20.11■□□□□ 0.81
HOMER3-206ENST00000594439 NUP43Q8NFH3 380 aa20.11■□□□□ 0.81
HOMER3-206ENST00000594439 OR4N2Q8NGD1 307 aa20.11■□□□□ 0.81
HOMER3-206ENST00000594439 OR52N2Q8NGI0 321 aa20.11■□□□□ 0.81
HOMER3-206ENST00000594439 OR5P2Q8WZ92 322 aa20.11■□□□□ 0.81
HOMER3-206ENST00000594439 SLC35A4Q96G79 324 aa20.11■□□□□ 0.81
HOMER3-206ENST00000594439 LMF2Q9BU23 707 aaKnown RBP20.11■□□□□ 0.81
HOMER3-206ENST00000594439 DUSP26Q9BV47 211 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 216.8 ms