RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-218	ENST00000580745	AHRR	A9YTQ3	701 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745		G3V2L1	256 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	SYT5	O00445	386 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	REM1	O75628	298 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	CTAG2	O75638	210 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	SHBG	P04278	402 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	CT45A8	P0DMV1	189 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	CT45A9	P0DMV2	189 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	DRD5	P21918	477 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	TIA1	P31483	386 aa	Known RBP eCLIP	10.13	□□□□□ -0.79	5e-6	■■■■□ 20.5
PPP4R1-218	ENST00000580745	DNAJA1	P31689	397 aa	Known RBP	10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	KIR2DL3	P43628	341 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	PPIC	P45877	212 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	ART1	P52961	327 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	TRA2B	P62995	288 aa	Known RBP	10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	RPP38	P78345	283 aa	Known RBP	10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	SRY	Q05066	204 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	ACSM2A	Q08AH3	577 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	FOXF2	Q12947	444 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	CSTF3	Q12996	717 aa	Known RBP	10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	LCP2	Q13094	533 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	CT45A2	Q5DJT8	189 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	ACSM2B	Q68CK6	577 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	TRMT10C	Q7L0Y3	403 aa	Known RBP	10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	LACC1	Q8IV20	430 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	OR7G2	Q8NG99	324 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	MTBP	Q96DY7	904 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	HSPBAP1	Q96EW2	488 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	ADO	Q96SZ5	270 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	TUBA1C	Q9BQE3	449 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	SHCBP1L	Q9BZQ2	653 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	MID1IP1	Q9NPA3	183 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	NMRK1	Q9NWW6	199 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	DNAJB12	Q9NXW2	375 aa	Known RBP	10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	PRODH2	Q9UF12	536 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	PSME2	Q9UL46	239 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	CFL2	Q9Y281	166 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	PCDHGB3	Q9Y5G1	929 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	ZNF407	Q9C0G0	2248 aa		10.13	□□□□□ -0.79
PPP4R1-218	ENST00000580745	FRG2C	A6NGY1	282 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	FAM47E-STBD1	D6RA91	191 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	DVL2	O14641	736 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	T	O15178	435 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	ACOX3	O15254	700 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	ANXA4	P09525	319 aa	Predicted RBP	10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	HSD3B1	P14060	373 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	NAGA	P17050	411 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	HSD3B2	P26439	372 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	TIMP3	P35625	211 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	IST1	P53990	364 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	NHSL2	Q5HYW2	709 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	SPDYA	Q5MJ70	313 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	NSUN5P2	Q63ZY6	315 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	SLC30A6	Q6NXT4	461 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	TRIM42	Q8IWZ5	723 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	IFT20	Q8IY31	132 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	LINC01560	Q8TB33	94 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	ZNF675	Q8TD23	568 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	EFHD2	Q96C19	240 aa	Predicted RBP	10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	L3HYPDH	Q96EM0	354 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	C11orf24	Q96F05	449 aa	Predicted RBP	10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	VSTM2L	Q96N03	204 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	COL21A1	Q96P44	957 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	G6PC3	Q9BUM1	346 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	FOLH1B	Q9HBA9	442 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	SLC35C2	Q9NQQ7	365 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	FLRT3	Q9NZU0	649 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	EXO1	Q9UQ84	846 aa	Known RBP	10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	POLR3H	Q9Y535	204 aa	Predicted RBP	10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	PTGDR2	Q9Y5Y4	395 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	CCDC168	Q8NDH2	2452 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	GTF3C1	Q12789	2109 aa		10.12	□□□□□ -0.79
PPP4R1-218	ENST00000580745	CD8B2	A6NJW9	211 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	SMIM23	A6NLE4	172 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	EEF1E1-BLOC1S5	C9J1V9	151 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	EEF1E1	O43324	174 aa	Known RBP	10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	TSPAN2	O60636	221 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	ERN1	O75460	977 aa	Known RBP	10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	IL2RA	P01589	272 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	JUN	P05412	331 aa	Known RBP	10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	DRD2	P14416	443 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	TACR1	P25103	407 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	ASCL1	P50553	236 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	PKNOX1	P55347	436 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	DCAF7	P61962	342 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	C2orf80	Q0P641	193 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	SH2D4B	Q5SQS7	431 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	TMEM81	Q6P7N7	255 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	TMEM107	Q6UX40	140 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	ZYG11A	Q6WRX3	759 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	SPNS3	Q6ZMD2	512 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	SH2D5	Q6ZV89	423 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	LARP4	Q71RC2	724 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	PLCZ1	Q86YW0	608 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	SLC22A9	Q8IVM8	553 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	SLC44A2	Q8IWA5	706 aa	Predicted RBP	10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	PM20D2	Q8IYS1	436 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	CEP112	Q8N8E3	955 aa		10.11	□□□□□ -0.79
PPP4R1-218	ENST00000580745	GBP7	Q8N8V2	638 aa	Predicted RBP	10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms