RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 TIA1P31483 386 aaKnown RBP eCLIP14.5□□□□□ -0.09
CRLF3-203ENST00000578692 PTGDSP41222 190 aa14.5□□□□□ -0.09
CRLF3-203ENST00000578692 SNTA1Q13424 505 aa14.5□□□□□ -0.09
CRLF3-203ENST00000578692 SF3B4Q15427 424 aaKnown RBP eCLIP14.5□□□□□ -0.095e-6■■□□□ 12.1
CRLF3-203ENST00000578692 EIPR1Q53HC9 387 aa14.5□□□□□ -0.09
CRLF3-203ENST00000578692 NHSL2Q5HYW2 709 aa14.5□□□□□ -0.09
CRLF3-203ENST00000578692 SPDYAQ5MJ70 313 aa14.5□□□□□ -0.09
CRLF3-203ENST00000578692 WIPI1Q5MNZ9 446 aaPredicted RBP14.5□□□□□ -0.09
CRLF3-203ENST00000578692 ANGPTL8Q6UXH0 198 aa14.5□□□□□ -0.09
CRLF3-203ENST00000578692 ZYG11AQ6WRX3 759 aa14.5□□□□□ -0.09
CRLF3-203ENST00000578692 SH2D5Q6ZV89 423 aa14.5□□□□□ -0.09
CRLF3-203ENST00000578692 GSPT2Q8IYD1 628 aaKnown RBP14.5□□□□□ -0.09
CRLF3-203ENST00000578692 INTS1Q8N201 2190 aaKnown RBP14.5□□□□□ -0.09
CRLF3-203ENST00000578692 KAT2AQ92830 837 aa14.5□□□□□ -0.09
CRLF3-203ENST00000578692 ERP27Q96DN0 273 aa14.5□□□□□ -0.09
CRLF3-203ENST00000578692 OSBPL11Q9BXB4 747 aa14.5□□□□□ -0.09
CRLF3-203ENST00000578692 PRDM14Q9GZV8 571 aa14.5□□□□□ -0.09
CRLF3-203ENST00000578692 SLC35C2Q9NQQ7 365 aa14.5□□□□□ -0.09
CRLF3-203ENST00000578692 GIMAP4Q9NUV9 329 aa14.5□□□□□ -0.09
CRLF3-203ENST00000578692 EHD3Q9NZN3 535 aa14.5□□□□□ -0.09
CRLF3-203ENST00000578692 KLRF1Q9NZS2 232 aa14.5□□□□□ -0.09
CRLF3-203ENST00000578692 REM1O75628 298 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 CEACAM8P31997 349 aaPredicted RBP14.49□□□□□ -0.09
CRLF3-203ENST00000578692 MPIP34949 423 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 TIMP3P35625 211 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 GSTM5P46439 218 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 CCT5P48643 541 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 NAGLUP54802 743 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 FOXA1P55317 472 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 DLX5P56178 289 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 NAA20P61599 178 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 C2orf80Q0P641 193 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 CEBPEQ15744 281 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 CCDC153Q494R4 210 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 ACSF3Q4G176 576 aaPredicted RBP14.49□□□□□ -0.09
CRLF3-203ENST00000578692 EIF1ADQ8N9N8 165 aaKnown RBP14.49□□□□□ -0.09
CRLF3-203ENST00000578692 FAM83FQ8NEG4 500 aaPredicted RBP14.49□□□□□ -0.09
CRLF3-203ENST00000578692 TNIP2Q8NFZ5 429 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 OR9A2Q8NGT5 310 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 ABTB1Q969K4 478 aaPredicted RBP14.49□□□□□ -0.09
CRLF3-203ENST00000578692 TMBIM1Q969X1 311 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 TMCO6Q96DC7 493 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 EBPLQ9BY08 206 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 UGT2B28Q9BY64 529 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 GALNT9Q9HCQ5 603 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 GRID1Q9ULK0 1009 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 EXO1Q9UQ84 846 aaKnown RBP14.49□□□□□ -0.09
CRLF3-203ENST00000578692 CAMK2AQ9UQM7 478 aa14.49□□□□□ -0.09
CRLF3-203ENST00000578692 OR6C70A6NIJ9 312 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 KDM4EB2RXH2 506 aaPredicted RBP14.48□□□□□ -0.09
CRLF3-203ENST00000578692 H3BQF6 201 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 SNPHO15079 494 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 CBR3O75828 277 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 IL2RAP01589 272 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 PROCP04070 461 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 SHBGP04278 402 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 CT45A8P0DMV1 189 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 CT45A9P0DMV2 189 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 MYBPHQ13203 477 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 IMPG1Q17R60 797 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 ERCC6LQ2NKX8 1250 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 CT45A2Q5DJT8 189 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 ARSKQ6UWY0 536 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 YRDCQ86U90 279 aaKnown RBP14.48□□□□□ -0.09
CRLF3-203ENST00000578692 CDH24Q86UP0 819 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 LACC1Q8IV20 430 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 LRRN4CLQ8ND94 238 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 UBLCP1Q8WVY7 318 aaPredicted RBP14.48□□□□□ -0.09
CRLF3-203ENST00000578692 TRIM44Q96DX7 344 aaPredicted RBP14.48□□□□□ -0.09
CRLF3-203ENST00000578692 WDYHV1Q96HA8 205 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 COL21A1Q96P44 957 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 BTBD9Q96Q07 612 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 BBS4Q96RK4 519 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 MAPRE3Q9UPY8 281 aa14.48□□□□□ -0.09
CRLF3-203ENST00000578692 PRAMEF25A6NGN4 478 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 SYT5O00445 386 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 DVL2O14641 736 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 PLOD3O60568 738 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 PLIN3O60664 434 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 NME6O75414 186 aaPredicted RBP14.47□□□□□ -0.09
CRLF3-203ENST00000578692 ERN1O75460 977 aaKnown RBP14.47□□□□□ -0.09
CRLF3-203ENST00000578692 ACTL6AO96019 429 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 DDCP20711 480 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 BMP5P22003 454 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 CRHR1P34998 444 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 SLCO1A2P46721 670 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 WNT3P56703 355 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 DNAJB13P59910 316 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 ZNF763Q0D2J5 394 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 CFAP157Q5JU67 520 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 NSUN5P2Q63ZY6 315 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 TRIM46Q7Z4K8 759 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 FAM9CQ8IZT9 166 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 WDSUB1Q8N9V3 476 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 NAXEQ8NCW5 288 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 CDC26Q8NHZ8 85 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 SLC35A4Q96G79 324 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 ADOQ96SZ5 270 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 SHCBP1LQ9BZQ2 653 aa14.47□□□□□ -0.09
CRLF3-203ENST00000578692 STMN4Q9H169 189 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms