RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	NAALAD2	Q9Y3Q0	740 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	SLC22A7	Q9Y694	548 aa		10.11	□□□□□ -0.79
SPIDR-222	ENST00000524006	SPTBN2	O15020	2390 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	SPAG17	Q6Q759	2223 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	LOC105369274	A0A096LPK9	316 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	LOC102723532	A0A0G2JNH3	316 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	BLACE	A4D250	179 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	EFCAB10	A6NFE3	127 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	TLR4	O00206	839 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	UBXN7	O94888	489 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	AK1	P00568	194 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	PROS1	P07225	676 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	CELA2B	P08218	269 aa	Predicted RBP	10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	OSM	P13725	252 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	ID4	P47928	161 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	ARL4D	P49703	201 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	CRISP1	P54107	249 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	MAZ	P56270	477 aa	Known RBP	10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	ALDH6A1	Q02252	535 aa	Known RBP	10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	PIGF	Q07326	219 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	TRAM2	Q15035	370 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	IQCC	Q4KMZ1	466 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	FRMPD2B	Q6IN97	320 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	MFSD12	Q6NUT3	480 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	FBXO42	Q6P3S6	717 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	SLC36A4	Q6YBV0	504 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	PRSS48	Q7RTY5	328 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	ZNF438	Q7Z4V0	828 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	IQCH	Q86VS3	1027 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	RANBP3L	Q86VV4	465 aa	Predicted RBP	10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	ENTHD1	Q8IYW4	607 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	OR4N4	Q8N0Y3	316 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	COX18	Q8N8Q8	333 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	GPR32P1	Q8NGA4	272 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	FLVCR1-AS1	Q8TAF5	88 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	TEX47	Q8TBZ9	253 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	C16orf58	Q96GQ5	468 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	CSF3R	Q99062	836 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	NELL2	Q99435	816 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	NIPSNAP1	Q9BPW8	284 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	TBC1D17	Q9HA65	648 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	ADAP2	Q9NPF8	381 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	PILRA	Q9UKJ1	303 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	CES1P1	Q9UKY3	287 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	WDR45	Q9Y484	360 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	PCDHGA6	Q9Y5G7	932 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	KLK4	Q9Y5K2	254 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006		R4GN57	208 aa		10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	COL5A1	P20908	1838 aa	Predicted RBP	10.1	□□□□□ -0.79
SPIDR-222	ENST00000524006	TPR	P12270	2363 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	CACNA1I	Q9P0X4	2223 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	TRBV4-1	A0A0J9YWV2	114 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	SH3D21	A4FU49	640 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	LILRA5	A6NI73	299 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	FAM170B	A6NMN3	283 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	RHPN2P1	A8MT19	583 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	TMEM229A	B2RXF0	380 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006		M0R3G1	203 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	B4GALT2	O60909	372 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	CNOT3	O75175	753 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	RDH16	O75452	317 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	DCN	P07585	359 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	RNH1	P13489	461 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	NME1	P15531	152 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	PRKAR1B	P31321	381 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	CAPZB	P47756	277 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	AVPR1B	P47901	424 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	PXN	P49023	591 aa	Predicted RBP	10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	HMGA2	P52926	109 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	HNRNPK	P61978	463 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	RACK1	P63244	317 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	SLC35A2	P78381	396 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	ID2	Q02363	134 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	OCA2	Q04671	838 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	DUSP2	Q05923	314 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	TARDBP	Q13148	414 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	DCTN2	Q13561	401 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	RUNX2	Q13950	521 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	CEBPE	Q15744	281 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	DEFB110	Q30KQ9	67 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	KLHL17	Q6TDP4	642 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	ZNF730	Q6ZMV8	503 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	USP53	Q70EK8	1073 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	DGLUCY	Q7Z3D6	616 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	P2RY8	Q86VZ1	359 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	CYP4Z2P	Q8N1L4	340 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	FAM160A2	Q8N612	972 aa	Predicted RBP	10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	DEFB119	Q8N690	84 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	OR7G2	Q8NG99	324 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	OR52P1P	Q8NH57	321 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	C9orf43	Q8TAL5	461 aa	Predicted RBP	10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	PIGX	Q8TBF5	258 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	CDS1	Q92903	461 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	AHCYL2	Q96HN2	611 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	ZNF681	Q96N22	645 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	LIN28A	Q9H9Z2	209 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	IL21R	Q9HBE5	538 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	GPR27	Q9NS67	375 aa		10.09	□□□□□ -0.79
SPIDR-222	ENST00000524006	RLIM	Q9NVW2	624 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms