RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 MAN2A2P49641 1150 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 NCBP2P52298 156 aaKnown RBP eCLIP11.82□□□□□ -0.52
HDAC1-209ENST00000484305 CORO7P57737 925 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 DCAF7P61962 342 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 PLCXD2Q0VAA5 305 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 CT45A2Q5DJT8 189 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 TBCELQ5QJ74 424 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 SH2D4BQ5SQS7 431 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 TMEM198Q66K66 360 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 IKBIPQ70UQ0 350 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 DDIASQ8IXT1 998 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 EID3Q8N140 333 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 OR5M9Q8NGP3 310 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 OR6Y1Q8NGX8 325 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 TWIST2Q8WVJ9 160 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 HGDQ93099 445 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 GFM2Q969S9 779 aaKnown RBP11.82□□□□□ -0.52
HDAC1-209ENST00000484305 NTNG2Q96CW9 530 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 FCRL1Q96LA6 429 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 ZNF597Q96LX8 424 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 BTBD9Q96Q07 612 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 NODALQ96S42 347 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 TP63Q9H3D4 680 aaPredicted RBP11.82□□□□□ -0.52
HDAC1-209ENST00000484305 GLIPR2Q9H4G4 154 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 EXO5Q9H790 373 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 FOLH1BQ9HBA9 442 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 EML4Q9HC35 981 aaKnown RBP11.82□□□□□ -0.52
HDAC1-209ENST00000484305 SENP1Q9P0U3 644 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 BAIAP2L1Q9UHR4 511 aa11.82□□□□□ -0.52
HDAC1-209ENST00000484305 KLF2Q9Y5W3 355 aaPredicted RBP11.82□□□□□ -0.52
HDAC1-209ENST00000484305 ITPR2Q14571 2701 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 TRGV5A0A0B4J1U4 118 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 PIP5K1BO14986 540 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 TO15178 435 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 CTIFO43310 598 aaKnown RBP11.81□□□□□ -0.52
HDAC1-209ENST00000484305 HCN1O60741 890 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 UGT2B11O75310 529 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 ERN1O75460 977 aaKnown RBP11.81□□□□□ -0.52
HDAC1-209ENST00000484305 SNX4O95219 450 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 NEFHP12036 1026 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 SDC1P18827 310 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 GDF1P27539 372 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 HTR1EP28566 365 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 MC3RP41968 323 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 TRPC1P48995 793 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 RPL38P63173 70 aaKnown RBP11.81□□□□□ -0.52
HDAC1-209ENST00000484305 RPP38P78345 283 aaKnown RBP11.81□□□□□ -0.52
HDAC1-209ENST00000484305 ZNF630Q2M218 657 aaPredicted RBP11.81□□□□□ -0.52
HDAC1-209ENST00000484305 GALNTL6Q49A17 601 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 CES4AQ5XG92 561 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 ANKRD26P1Q6NSI1 321 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 NPSR1Q6W5P4 371 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 NUP54Q7Z3B4 507 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 EXOC3L1Q86VI1 746 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 PACS2Q86VP3 889 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 SLC34A3Q8N130 599 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 TMBIM1Q969X1 311 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 PKNOX2Q96KN3 472 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 VSTM2LQ96N03 204 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 AMDHD1Q96NU7 426 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 GNRHR2Q96P88 292 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 CCT7Q99832 543 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 SLC6A15Q9H2J7 730 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 METTL7AQ9H8H3 244 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 ACKR4Q9NPB9 350 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 QPCTLQ9NXS2 382 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 SPRR3Q9UBC9 169 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 B4GALT7Q9UBV7 327 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 GIMAP2Q9UG22 337 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 ZDHHC2Q9UIJ5 367 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 ACAD8Q9UKU7 415 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 ARHGAP21Q5T5U3 1957 aa11.81□□□□□ -0.52
HDAC1-209ENST00000484305 NOTCH2Q04721 2471 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 A0A087WV62 115 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 C2orf72A6NCS6 295 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 UPK1AO00322 258 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 BCKDKO14874 412 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 AKAP10O43572 662 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 ICOSLGO75144 302 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 REM1O75628 298 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 CLDN14O95500 239 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 NTSP30990 170 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 SERPINB5P36952 375 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 PTGDSP41222 190 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 MASP1P48740 699 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 PMPCAQ10713 525 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 TNFAIP8L3Q5GJ75 292 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 CEP85LQ5SZL2 805 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 TMEM211Q6ICI0 200 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 ZNF585AQ6P3V2 769 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 TMEM81Q6P7N7 255 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 TMEM107Q6UX40 140 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 NUDCD3Q8IVD9 361 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 SLC44A2Q8IWA5 706 aaPredicted RBP11.8□□□□□ -0.52
HDAC1-209ENST00000484305 OR4N2Q8NGD1 307 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 CLHC1Q8NHS4 586 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 NEIL3Q8TAT5 605 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 CIDECQ96AQ7 238 aaPredicted RBP11.8□□□□□ -0.52
HDAC1-209ENST00000484305 SARAFQ96BY9 339 aa11.8□□□□□ -0.52
HDAC1-209ENST00000484305 SDCCAG3Q96C92 435 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms