RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 HSD3B2P26439 372 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 CLDN8P56748 225 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 ZC3H14Q6PJT7 736 aaKnown RBP11.46□□□□□ -0.57
UBR4-205ENST00000417040 RNF111Q6ZNA4 994 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 Q6ZPB1 254 aaPredicted RBP11.46□□□□□ -0.57
UBR4-205ENST00000417040 MFSD6LQ8IWD5 586 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 ANKK1Q8NFD2 765 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 PCYT2Q99447 389 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 GSTO2Q9H4Y5 243 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 ZNF223Q9UK11 482 aaPredicted RBP11.46□□□□□ -0.57
UBR4-205ENST00000417040 GXYLT2A0PJZ3 443 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 MEIS3P2A8K0S8 358 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 LMAN2Q12907 356 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 OR4C11Q6IEV9 310 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 ZNF529Q6P280 563 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 ACBD7Q8N6N7 88 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 NECAB3Q96P71 396 aaPredicted RBP11.46□□□□□ -0.57
UBR4-205ENST00000417040 SLC2A13Q96QE2 648 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 C20orf27Q9GZN8 174 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 EDDM13A0A1B0GTR0 161 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 DCNP07585 359 aaKnown RBP11.46□□□□□ -0.58
UBR4-205ENST00000417040 CD3GP09693 182 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 OR8U9P0C7N5 309 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 FXYD4P59646 89 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 DEFB134Q4QY38 66 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 CATSPEREQ5SY80 951 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 PIP5KL1Q5T9C9 394 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 GDPD1Q8N9F7 314 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 OR5D16Q8NGK9 328 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 OR5AK2Q8NH90 309 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 NPRL2Q8WTW4 380 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 ACTL8Q9H568 366 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 A0A1W2PQ45 241 aaPredicted RBP11.46□□□□□ -0.58
UBR4-205ENST00000417040 A0A1W2PQY0 241 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 WASHC1A8K0Z3 465 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 EMC8O43402 210 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 GPX3P22352 226 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 C21orf33P30042 268 aaPredicted RBP11.46□□□□□ -0.58
UBR4-205ENST00000417040 P2RY14Q15391 338 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 BAIAP2L2Q6UXY1 529 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 GRASPQ7Z6J2 395 aaPredicted RBP11.46□□□□□ -0.58
UBR4-205ENST00000417040 SUN3Q8TAQ9 357 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 SYNPRQ8TBG9 265 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 ALG8Q9BVK2 526 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 STRA6Q9BX79 667 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 RNF32Q9H0A6 362 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 EMCNQ9ULC0 261 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 COPS3Q9UNS2 423 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 HSPE1-MOB4S4R3N1 261 aa11.46□□□□□ -0.58
UBR4-205ENST00000417040 GJB3O75712 270 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 OSMP13725 252 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 GIFP27352 417 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 SLC5A2P31639 672 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 MGAT3Q09327 533 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 SELPLGQ14242 412 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 UBXN2BQ14CS0 331 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 PPA1Q15181 289 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 WDR53Q7Z5U6 358 aaPredicted RBP11.45□□□□□ -0.58
UBR4-205ENST00000417040 TMEM173Q86WV6 379 aaPredicted RBP11.45□□□□□ -0.58
UBR4-205ENST00000417040 SIAH1Q8IUQ4 282 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 C7orf61Q8IZ16 206 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 CELF5Q8N6W0 485 aaKnown RBP11.45□□□□□ -0.58
UBR4-205ENST00000417040 ZMYND19Q96E35 227 aaPredicted RBP11.45□□□□□ -0.58
UBR4-205ENST00000417040 FOXN4Q96NZ1 517 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 ST6GALNAC5Q9BVH7 336 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 OR51J1Q9H342 316 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 TXNRD2Q9NNW7 524 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 COPZ2Q9P299 210 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 NEURL4Q96JN8 1562 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 LTN1O94822 1766 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 ZCWPW2A0A1B0GU75 182 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 ANKRD33BA6NCL7 494 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 OIP5O43482 229 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 WDPCPO95876 746 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 KCNE1P15382 129 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 ALDH3B1P43353 468 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 ACTC1P68032 377 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 ACTA1P68133 377 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 HOXC5Q00444 222 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 SLC35F2Q8IXU6 374 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 HCAR2Q8TDS4 363 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 AGPAT4Q9NRZ5 378 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 AP1M2Q9Y6Q5 423 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 NPIPA5A0A0B4J1W7 369 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 A0A1W2PQ09 198 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 ZNF705FA8MVS1 300 aaPredicted RBP11.45□□□□□ -0.58
UBR4-205ENST00000417040 B8ZZF3 427 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 NPIPA7E9PJI5 369 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 SC5DO75845 299 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 ADAP00813 363 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 ZNF705DP0CH99 300 aaPredicted RBP11.45□□□□□ -0.58
UBR4-205ENST00000417040 ZNF705BP0CI00 300 aaPredicted RBP11.45□□□□□ -0.58
UBR4-205ENST00000417040 NPIPA8P0DM63 369 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 KCNJ5P48544 419 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 C3orf33Q6P1S2 294 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 KDM1BQ8NB78 822 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 ECHDC3Q96DC8 303 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 C12orf42Q96LP6 360 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 B3GAT2Q9NPZ5 323 aa11.45□□□□□ -0.58
UBR4-205ENST00000417040 THSD1Q9NS62 852 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms