RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CORO7P57737 925 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 NUP107P57740 925 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 DCAF7P61962 342 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 CT45A2Q5DJT8 189 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 ZNF585AQ6P3V2 769 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 Q6ZSR9 355 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 NUP54Q7Z3B4 507 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 TCP10LQ8TDR4 215 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 EGLN2Q96KS0 407 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 VSTM2LQ96N03 204 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 BTBD9Q96Q07 612 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 BBS4Q96RK4 519 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 TRMOQ9BU70 441 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 UBQLN3Q9H347 655 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 EXO5Q9H790 373 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 GIMAP4Q9NUV9 329 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 RNF6Q9Y252 685 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 FIS1Q9Y3D6 152 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 FAM215AQ9Y5M1 114 aa16.21■□□□□ 0.19
LSM5-204ENST00000409909 FRG2CA6NGY1 282 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 TMEM233B4DJY2 109 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 NPIPB8E9PQR5 432 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 SLC28A1O00337 649 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 UGT2B11O75310 529 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 BCAS2O75934 225 aaPredicted RBP16.2■□□□□ 0.18
LSM5-204ENST00000409909 JUNP05412 331 aaKnown RBP16.2■□□□□ 0.18
LSM5-204ENST00000409909 GDF1P27539 372 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 PTGDSP41222 190 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 PLCXD2Q0VAA5 305 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 ERCC6LQ2NKX8 1250 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 UGT3A2Q3SY77 523 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 KANK2Q63ZY3 851 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 NPSR1Q6W5P4 371 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 PACS2Q86VP3 889 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 CCDC71Q8IV32 467 aaPredicted RBP16.2■□□□□ 0.18
LSM5-204ENST00000409909 FAM9CQ8IZT9 166 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 NEIL3Q8TAT5 605 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 CA5BP1Q8WTZ4 195 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 RND1Q92730 232 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 TMBIM1Q969X1 311 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 SARAFQ96BY9 339 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 METTL2AQ96IZ6 378 aaKnown RBP16.2■□□□□ 0.18
LSM5-204ENST00000409909 TMEM109Q9BVC6 243 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 PARD6BQ9BYG5 372 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 C1orf109Q9NX04 203 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 COQ3Q9NZJ6 369 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 B4GALT7Q9UBV7 327 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 C15orf41Q9Y2V0 281 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 WBP11Q9Y2W2 641 aaKnown RBP16.2■□□□□ 0.18
LSM5-204ENST00000409909 DNAJC15Q9Y5T4 150 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 PDZD2O15018 2839 aa16.2■□□□□ 0.18
LSM5-204ENST00000409909 CSMD2Q7Z408 3487 aa16.19■□□□□ 0.18
LSM5-204ENST00000409909 C2orf72A6NCS6 295 aa16.19■□□□□ 0.18
LSM5-204ENST00000409909 FGF4P08620 206 aa16.19■□□□□ 0.18
LSM5-204ENST00000409909 LINC00032P0C843 101 aa16.19■□□□□ 0.18
LSM5-204ENST00000409909 NCBP2P52298 156 aaKnown RBP eCLIP16.19■□□□□ 0.18
LSM5-204ENST00000409909 RPP38P78345 283 aaKnown RBP16.19■□□□□ 0.18
LSM5-204ENST00000409909 ARL13AQ5H913 290 aaPredicted RBP16.19■□□□□ 0.18
LSM5-204ENST00000409909 TMEM81Q6P7N7 255 aa16.19■□□□□ 0.18
LSM5-204ENST00000409909 RNF165Q6ZSG1 346 aa16.19■□□□□ 0.18
LSM5-204ENST00000409909 MCEMP1Q8IX19 187 aa16.19■□□□□ 0.18
LSM5-204ENST00000409909 MREGQ8N565 214 aa16.19■□□□□ 0.18
LSM5-204ENST00000409909 TMEM41AQ96HV5 264 aa16.19■□□□□ 0.18
LSM5-204ENST00000409909 FCRL1Q96LA6 429 aa16.19■□□□□ 0.18
LSM5-204ENST00000409909 TTYH2Q9BSA4 534 aa16.19■□□□□ 0.18
LSM5-204ENST00000409909 METTL7AQ9H8H3 244 aa16.19■□□□□ 0.18
LSM5-204ENST00000409909 FOLH1BQ9HBA9 442 aa16.19■□□□□ 0.18
LSM5-204ENST00000409909 LRTM1Q9HBL6 345 aa16.19■□□□□ 0.18
LSM5-204ENST00000409909 GALNT9Q9HCQ5 603 aa16.19■□□□□ 0.18
LSM5-204ENST00000409909 MIEF1Q9NQG6 463 aa16.19■□□□□ 0.18
LSM5-204ENST00000409909 FIGNL2A6NMB9 653 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 GNB5O14775 395 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 RGS14O43566 566 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 NPHS1O60500 1241 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 ICOSLGO75144 302 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 ERN1O75460 977 aaKnown RBP16.18■□□□□ 0.18
LSM5-204ENST00000409909 TRAPPC6AO75865 159 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 HPNP05981 417 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 GLI4P10075 376 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 ARRB2P32121 409 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 MASP1P48740 699 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 CDK9P50750 372 aaKnown RBP16.18■□□□□ 0.18
LSM5-204ENST00000409909 RFTN2Q52LD8 501 aaPredicted RBP16.18■□□□□ 0.18
LSM5-204ENST00000409909 WLSQ5T9L3 541 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 TIGD3Q6B0B8 471 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 ZCCHC23Q6ZST2 131 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 ACAD11Q709F0 780 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 IKBIPQ70UQ0 350 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 OR4N2Q8NGD1 307 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 LILRB4Q8NHJ6 448 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 GFM2Q969S9 779 aaKnown RBP16.18■□□□□ 0.18
LSM5-204ENST00000409909 AMDHD1Q96NU7 426 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 COL21A1Q96P44 957 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 UCK2Q9BZX2 261 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 GLIPR2Q9H4G4 154 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 ALKBH4Q9NXW9 302 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 SENP1Q9P0U3 644 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 TRAF6Q9Y4K3 522 aa16.18■□□□□ 0.18
LSM5-204ENST00000409909 MED12Q93074 2177 aa16.17■□□□□ 0.18
LSM5-204ENST00000409909 A0A087WV62 115 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms