RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 MTFR2Q6P444 385 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 BRAT1Q6PJG6 821 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 MACC1Q6ZN28 852 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 C17orf107Q6ZR85 190 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 ERN2Q76MJ5 926 aaKnown RBP8.61□□□□□ -1.03
TOP1-201ENST00000361337 NXPE1Q8N323 547 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 C1orf52Q8N6N3 182 aaKnown RBP8.61□□□□□ -1.03
TOP1-201ENST00000361337 DENND6BQ8NEG7 585 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 CIDECQ96AQ7 238 aaPredicted RBP8.61□□□□□ -1.03
TOP1-201ENST00000361337 SCRN2Q96FV2 425 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 C12orf66Q96MD2 445 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 CDCA4Q9BXL8 241 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 ZCCHC2Q9C0B9 1178 aaKnown RBP8.61□□□□□ -1.03
TOP1-201ENST00000361337 POLR2J2Q9GZM3 115 aaKnown RBP8.61□□□□□ -1.03
TOP1-201ENST00000361337 RDH14Q9HBH5 336 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 CTPS2Q9NRF8 586 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 DZANK1Q9NVP4 752 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 TMPRSS11EQ9UL52 423 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 TRAPPC4Q9Y296 219 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 PCDHGB2Q9Y5G2 931 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 DNAH14Q0VDD8 3507 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 OBSL1O75147 1896 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 UNC13CQ8NB66 2214 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 TRBV5-4A0A0C4DH59 114 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 LOC102723532A0A0G2JNH3 316 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 HMX3A6NHT5 357 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 B4DXG7 233 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 INMT-MINDY4F8WBC2 141 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 CACNB4O00305 520 aaPredicted RBP8.61□□□□□ -1.03
TOP1-201ENST00000361337 ATG13O75143 517 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 CCNB2O95067 398 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 ZNF250P15622 560 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 CBR1P16152 277 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 ITGA2P17301 1181 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 KIR2DL3P43628 341 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 SLC6A12P48065 614 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 STARP49675 285 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 DSTNP60981 165 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 HBA1P69905 142 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 PSPHP78330 225 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 MLLT1Q03111 559 aaPredicted RBP8.61□□□□□ -1.03
TOP1-201ENST00000361337 CST6Q15828 149 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 IER5LQ5T953 404 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 PLAG1Q6DJT9 500 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 METTL2BQ6P1Q9 378 aaKnown RBP8.61□□□□□ -1.03
TOP1-201ENST00000361337 L3MBTL4Q8NA19 623 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 SYT14Q8NB59 555 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 NLGN4YQ8NFZ3 816 aaPredicted RBP8.61□□□□□ -1.03
TOP1-201ENST00000361337 OR8J2Q8NGG1 315 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 GATAD2BQ8WXI9 593 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 METTL2AQ96IZ6 378 aaKnown RBP8.61□□□□□ -1.03
TOP1-201ENST00000361337 SLC6A18Q96N87 628 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 RBCK1Q9BYM8 510 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 POFUT2Q9Y2G5 429 aa8.61□□□□□ -1.03
TOP1-201ENST00000361337 SCAMP2O15127 329 aaKnown RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 PLA2G10O15496 165 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 TPST2O60704 377 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 ERP29P30040 261 aaKnown RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 VIPR1P32241 457 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 PFN3P60673 137 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 SRSF11Q05519 484 aaKnown RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 ZNF77Q15935 545 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 PRSS53Q2L4Q9 553 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.6□□□□□ -1.038e-9■■■□□ 18.3
TOP1-201ENST00000361337 CRTC2Q53ET0 693 aaPredicted RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 TAF8Q7Z7C8 310 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 METTL3Q86U44 580 aaKnown RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 CHCHD4Q8N4Q1 142 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 OR4M1Q8NGD0 313 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 OR4A15Q8NGL6 344 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 HCAR2Q8TDS4 363 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 KAT2AQ92830 837 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 CXorf40BQ96DE9 158 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 WFDC6Q9BQY6 131 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 FOXQ1Q9C009 403 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 SLA2Q9H6Q3 261 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 WDR26Q9H7D7 661 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 ERVMER34-1Q9H9K5 563 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 KCNK12Q9HB15 430 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 PRDM6Q9NQX0 595 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 FTSJ1Q9UET6 329 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 CYB5R1Q9UHQ9 305 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 LSM2Q9Y333 95 aaKnown RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 MAP4K5Q9Y4K4 846 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 A0A075B6Q4 140 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 H0Y8X5 98 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 ADAMDEC1O15204 470 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 ATP1B2P14415 290 aaPredicted RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 TYRP1P17643 537 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 PRPH2P23942 346 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 SPINT3P49223 89 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 OLR1P78380 273 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 HNRNPA0Q13151 305 aaKnown RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 CPTPQ5TA50 214 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 PTCRAQ6ISU1 281 aaPredicted RBP8.6□□□□□ -1.03
TOP1-201ENST00000361337 ADIPOR2Q86V24 386 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 PARGQ86W56 976 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 LAS2Q8IYD9 372 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 MMP21Q8N119 569 aa8.6□□□□□ -1.03
TOP1-201ENST00000361337 ZFP41Q8N8Y5 198 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms