RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 EIF1AXP47813 144 aaKnown RBP16.21■□□□□ 0.19
TRAPPC11-201ENST00000334690 CD97P48960 835 aa16.21■□□□□ 0.19
TRAPPC11-201ENST00000334690 GNG2P59768 71 aa16.21■□□□□ 0.19
TRAPPC11-201ENST00000334690 GRIN2CQ14957 1233 aa16.21■□□□□ 0.19
TRAPPC11-201ENST00000334690 NNATQ16517 81 aa16.21■□□□□ 0.19
TRAPPC11-201ENST00000334690 FRMPD2BQ6IN97 320 aa16.21■□□□□ 0.19
TRAPPC11-201ENST00000334690 SLC25A25Q6KCM7 469 aa16.21■□□□□ 0.19
TRAPPC11-201ENST00000334690 ZFP41Q8N8Y5 198 aa16.21■□□□□ 0.19
TRAPPC11-201ENST00000334690 OR5M3Q8NGP4 307 aa16.21■□□□□ 0.19
TRAPPC11-201ENST00000334690 CIDECQ96AQ7 238 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC11-201ENST00000334690 ZFYVE21Q9BQ24 234 aa16.21■□□□□ 0.19
TRAPPC11-201ENST00000334690 C12orf4Q9NQ89 552 aa16.21■□□□□ 0.19
TRAPPC11-201ENST00000334690 MGAT4AQ9UM21 535 aa16.21■□□□□ 0.19
TRAPPC11-201ENST00000334690 SH2B3Q9UQQ2 575 aa16.21■□□□□ 0.19
TRAPPC11-201ENST00000334690 CARD8Q9Y2G2 431 aa16.21■□□□□ 0.19
TRAPPC11-201ENST00000334690 MAB21L2Q9Y586 359 aa16.21■□□□□ 0.19
TRAPPC11-201ENST00000334690 FUOMA2VDF0 154 aa16.21■□□□□ 0.18
TRAPPC11-201ENST00000334690 ADAM12O43184 909 aa16.21■□□□□ 0.18
TRAPPC11-201ENST00000334690 LILRB3O75022 631 aa16.21■□□□□ 0.18
TRAPPC11-201ENST00000334690 APOC1P02654 83 aa16.21■□□□□ 0.18
TRAPPC11-201ENST00000334690 TIMP2P16035 220 aa16.21■□□□□ 0.18
TRAPPC11-201ENST00000334690 PRLHRP49683 370 aa16.21■□□□□ 0.18
TRAPPC11-201ENST00000334690 RPL6Q02878 288 aaKnown RBP16.21■□□□□ 0.18
TRAPPC11-201ENST00000334690 LILRA2Q8N149 483 aa16.21■□□□□ 0.18
TRAPPC11-201ENST00000334690 LNX2Q8N448 690 aa16.21■□□□□ 0.18
TRAPPC11-201ENST00000334690 TMEM102Q8N9M5 508 aaPredicted RBP16.21■□□□□ 0.18
TRAPPC11-201ENST00000334690 TMIEQ8NEW7 156 aa16.21■□□□□ 0.18
TRAPPC11-201ENST00000334690 PINK1Q9BXM7 581 aa16.21■□□□□ 0.18
TRAPPC11-201ENST00000334690 RANBP3Q9H6Z4 567 aaPredicted RBP16.21■□□□□ 0.18
TRAPPC11-201ENST00000334690 ITGB4P16144 1822 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 M0R233 179 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 TSPAN4O14817 238 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 CHP2O43745 196 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 ADORA3P0DMS8 318 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 PGCP20142 388 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 CDKN2CP42773 168 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 PHF19Q5T6S3 580 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 PLBD1Q6P4A8 553 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 OR8K3Q8NH51 312 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 CCDC115Q96NT0 180 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 COPZ2Q9P299 210 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 APOBEC3BQ9UH17 382 aaKnown RBP16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 PLCL2Q9UPR0 1127 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 SPEF1Q9Y4P9 236 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 ENTPD2Q9Y5L3 495 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 IGLV3-10A0A075B6K4 115 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 A8MV72 311 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 C11orf98E9PRG8 122 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 TRA2BP62995 288 aaKnown RBP16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 C1orf61Q13536 156 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 OR2T4Q8NH00 348 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 TMEM246Q9BRR3 403 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 WDR83Q9BRX9 315 aaKnown RBP16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 B3GAT2Q9NPZ5 323 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 PCDHB16Q9NRJ7 776 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 ALG5Q9Y673 324 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 ACOT8O14734 319 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 EMX1Q04741 257 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 PRKCDQ05655 676 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 ELOAQ14241 798 aaKnown RBP16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 BTBD16Q32M84 506 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 ZNF791Q3KP31 576 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 ZNF691Q5VV52 312 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 Q6ZSR9 355 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 PARS2Q7L3T8 475 aaKnown RBP16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 TMPRSS12Q86WS5 348 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 SETD6Q8TBK2 473 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 CACNG6Q9BXT2 260 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 SLC6A16Q9GZN6 736 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 HHATLQ9HCP6 504 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 SRA1Q9HD15 236 aaKnown RBP16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 RXFP3Q9NSD7 469 aa16.2■□□□□ 0.18
TRAPPC11-201ENST00000334690 TCRBV21S2A2A0A5A6 115 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 EIF1AYO14602 144 aaKnown RBP16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 TIMP1P01033 207 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 HMGN2P05204 90 aaKnown RBP16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 PRKCAP17252 672 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 JUNDP17535 347 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 SHC2P98077 582 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 PLCXD2Q0VAA5 305 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 TBCEQ15813 527 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 RPS26P11Q5JNZ5 115 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 IQCF1Q8N6M8 205 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 SPERTQ8NA61 448 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 OR2L2Q8NH16 312 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 BADQ92934 168 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 ITFG2Q969R8 447 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 ZNF583Q96ND8 569 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 GTPBP2Q9BX10 602 aaKnown RBP16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 CYP8B1Q9UNU6 501 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 HS3ST2Q9Y278 367 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 PLEKHA6Q9Y2H5 1048 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 GPR52Q9Y2T5 361 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 HTR3EA5X5Y0 456 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 OR2B3O76000 313 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 IL7P13232 177 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 HLA-FP30511 346 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 DPP6P42658 865 aa16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 FRKP42685 505 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC11-201ENST00000334690 NTRK2Q16620 822 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms